XLOC_015078 (rpl14)


Basic Information

Item Value
gene id XLOC_015078
gene name rpl14
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007130.7
NCBI id CM002903.2
chromosome length 48449771
location 48364312 ~ 48371092 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00029678
AGCGCTGAAACGGAAGGCTCTTCACTCCAGAGCGGAAGTGCCCTCGTTCTTTTTCTACCCCGGTCTGCCATCATGGTGTTCAAGCGTTTCGTGGAGATCGGCCGCGTGGCCTTCATCGCTTTCGGTCCTCATGAGGGGAAACTGGTGGCCATCGTGGACGTGATCGACCAGAACAGGGCTCTGGTAGACGGACCGTGCACTGGAGTGAAGCGTCAGGCGCTGCCCTTCAAGTGTCTGCAGCTCACAGATTACGTCATTAAAGTCCCTCACAGtgcccGTCAGAAGTACGTGCGACGCGCCTGGGAAAAGGCTGAGATCAGCAAGAAGTGGGAGGAGAGCAGCTGGGCCAAGAAGATCGAGGCCAGGAagaagAGAGCTGCAATGTCTGACTTTGATCGCTACAAGGTGTCGAAGGCCAAGAAAATGAGGAATAAGATCATCAGACACGAGATGAAGAAGCTCCAGAAAGCTGCGGCTCAGAAGAAAGCATAAACTCTCAATAAACCAGTTTAACTGTAAAGCAGACTCTGCTCGTCTCTTAAACTCAGTGTATTTTCAGATCATTGCTCTGATCTTTCTTCAGTGTGGAACCTTTACTTTATAGATGTTAGTTTATGGTGTGTTTACTGGTTCTGAGCTTTTACTTTAGGattatttcttctgaaaaaagaacagaaaagacTTGAATTCAAATGATACGTGCACACATTACTATATCATCCTTTTATATATTAGACTGATTTACTCTTCCGGTTACAAAACATACAAATGTGTAAGAAatctatattttgatggaaacaaaACCATTTCACTCTCCAAATCTATAAAACACACAGAAACTGGTCTGCATTTTggtaaaatctgtttattttgcaTGACCTGTTAACTGTAAAAGGCTGTAACTGTAAAATGTGCGTGCAAGAAGCAACCTTCATTTAATAATACAGCTTTCTTTAACCAGTCTTGATCTCAATGTTTTAGCATGTTGAATTGTAGCCAGACACACATCTGTTTGTTTTGCAGTCTGCTGTTGGCATGGTTTATCCAAATATGATCGTCACTTCCTCGTC

Function

symbol description
rpl14 Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in systemic lupus erythematosus. Orthologous to human RPL14 (ribosomal protein L14).

GO:

id name namespace
GO:0006412 translation biological_process
GO:0042273 ribosomal large subunit biogenesis biological_process
GO:0022625 cytosolic large ribosomal subunit cellular_component
GO:0005840 ribosome cellular_component
GO:0003723 RNA binding molecular_function
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
ko03010 Ribosome
ko05171 Coronavirus disease - COVID-19
ko03011 Ribosome

ZFIN:

id description
ZDB-GENE-030131-2085 Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Human ortholog(s) of this gene implicated in systemic lupus erythematosus. Orthologous to human RPL14 (ribosomal protein L14).

Ensembl:

ensembl_id ENSDARG00000103433

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00029678 True 1070 mRNA 0.43 6 48364312 48371092

Neighbor

gene id symbol gene type direction distance location
XLOC_015077 NA coding downstream 15311 48339346 ~ 48349001 (-)
XLOC_015076 NA coding downstream 27777 48334088 ~ 48336535 (-)
XLOC_015075 NA coding downstream 34011 48328548 ~ 48330301 (-)
XLOC_015074 si:ch73-359m17.9 coding downstream 52203 48308750 ~ 48312109 (-)
XLOC_015073 si:ch73-359m17.11 coding downstream 57547 48300293 ~ 48306765 (-)
XLOC_015079 si:ch73-359m17.2 coding upstream 11871 48382963 ~ 48391434 (-)
XLOC_014711 CR382300.3 misc downstream 28635557 19728690 ~ 19728755 (-)
XLOC_015072 NA non-coding downstream 122475 48237650 ~ 48241837 (-)
XLOC_015071 NA non-coding downstream 178155 48185298 ~ 48186157 (-)

Expression


Co-expression Network