Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_015414 |
| gene name | NA |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007113.7 |
| NCBI id | CM002886.2 |
| chromosome length | 59640629 |
| location | 23156012 ~ 23184804 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0015804 | neutral amino acid transport | biological_process |
| GO:0043297 | apical junction assembly | biological_process |
| GO:0015849 | organic acid transport | biological_process |
| GO:0070830 | bicellular tight junction assembly | biological_process |
| GO:0045216 | cell-cell junction organization | biological_process |
| GO:0046942 | carboxylic acid transport | biological_process |
| GO:0007043 | cell-cell junction assembly | biological_process |
| GO:0009410 | response to xenobiotic stimulus | biological_process |
| GO:0034329 | cell junction assembly | biological_process |
| GO:0034330 | cell junction organization | biological_process |
| GO:0071466 | cellular response to xenobiotic stimulus | biological_process |
| GO:0015711 | organic anion transport | biological_process |
| GO:0006820 | anion transport | biological_process |
| GO:0120192 | tight junction assembly | biological_process |
| GO:0120193 | tight junction organization | biological_process |
| GO:0006865 | amino acid transport | biological_process |
| GO:0005911 | cell-cell junction | cellular_component |
| GO:0030054 | cell junction | cellular_component |
| GO:0015171 | amino acid transmembrane transporter activity | molecular_function |
| GO:0015175 | neutral amino acid transmembrane transporter activity | molecular_function |
| GO:0015179 | L-amino acid transmembrane transporter activity | molecular_function |
| GO:0008514 | organic anion transmembrane transporter activity | molecular_function |
| GO:0046943 | carboxylic acid transmembrane transporter activity | molecular_function |
| GO:0015349 | thyroid hormone transmembrane transporter activity | molecular_function |
| GO:0005342 | organic acid transmembrane transporter activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00033524 | False | 28793 | lncRNA | 0.35 | 1 | 23156012 | 23184804 |
| TCONS_00033525 | False | 19176 | lncRNA | 0.34 | 5 | 23156014 | 23184804 |
| TCONS_00030853 | True | 22570 | lncRNA | 0.34 | 4 | 23156047 | 23184804 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_015413 | si:dkey-218h11.6 | coding | upstream | 23878 | 23130389 ~ 23132134 (+) |
| XLOC_015412 | mfsd12a | coding | upstream | 52863 | 23081247 ~ 23103149 (+) |
| XLOC_015411 | csnk1g2a | coding | upstream | 77264 | 23039041 ~ 23078748 (+) |
| XLOC_015410 | NA | coding | upstream | 129034 | 23025321 ~ 23026978 (+) |
| XLOC_015409 | mknk2a | coding | upstream | 131060 | 23006792 ~ 23024952 (+) |
| XLOC_015415 | kifap3b | coding | downstream | 38135 | 23222939 ~ 23293501 (+) |
| XLOC_015416 | BX548024.3 | coding | downstream | 72973 | 23257777 ~ 23257897 (+) |
| XLOC_015417 | rnf2 | coding | downstream | 166650 | 23351454 ~ 23361933 (+) |
| XLOC_015418 | NA | coding | downstream | 221649 | 23406453 ~ 23479246 (+) |
| XLOC_015419 | NA | coding | downstream | 230079 | 23414883 ~ 23421047 (+) |
| XLOC_015408 | NA | non-coding | upstream | 163983 | 22985130 ~ 22992029 (+) |
| XLOC_015407 | NA | non-coding | upstream | 239628 | 22911192 ~ 22916384 (+) |
| XLOC_015392 | CT956055.1 | non-coding | upstream | 1184603 | 21882881 ~ 21971409 (+) |
| XLOC_015388 | NA | non-coding | upstream | 1618740 | 21534038 ~ 21537272 (+) |
| XLOC_015420 | NA | non-coding | downstream | 265968 | 23450772 ~ 23451401 (+) |
| XLOC_015422 | NA | non-coding | downstream | 356923 | 23541727 ~ 23609276 (+) |
