XLOC_016007


Basic Information

Item Value
gene id XLOC_016007
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 57998296 ~ 57998583 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033335
GTCCACatttgacgtctatttgacatccacacattgatgccttTTTGGCCATCAAAAGACACAAAATTTGTTATAAAATACGAAATGTTTAATTATATGAAAGCTTCGATTCAAAATCCTAATTTACGCAGATTTTTGTACTAATTAAAGCATAAAAAAGCATCAGAAATTCTAAACGATTAGATGTCtaaaccttgacgtctatttgacatccaatGATTGATGCAtttttaccatcaaaataaagacacaaaaagtCTAATAAGTTTTACTTGACTGAAAGCTTTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033335 True 288 lncRNA 0.30 1 57998296 57998583

Neighbor

gene id symbol gene type direction distance location
XLOC_016006 NA coding upstream 75580 57919451 ~ 57922716 (+)
XLOC_016005 plekhj1 coding upstream 89278 57848844 ~ 57909018 (+)
XLOC_016004 si:dkeyp-68b7.10 coding upstream 179157 57801960 ~ 57819139 (+)
XLOC_016003 NA coding upstream 377861 57619231 ~ 57620435 (+)
XLOC_016002 onecut3b coding upstream 434408 57504073 ~ 57563888 (+)
XLOC_016008 si:ch211-155e24.3 coding downstream 10397 58008980 ~ 58014652 (+)
XLOC_016009 NA coding downstream 25091 58023674 ~ 58024300 (+)
XLOC_016010 NA coding downstream 89187 58087770 ~ 58088301 (+)
XLOC_016011 NA coding downstream 144786 58143369 ~ 58174563 (+)
XLOC_016012 KCNJ10 coding downstream 222580 58221163 ~ 58242865 (+)
XLOC_016001 NA non-coding upstream 770003 57226376 ~ 57228293 (+)
XLOC_016000 NA non-coding upstream 785809 57204631 ~ 57212487 (+)
XLOC_015998 NA non-coding upstream 876483 57117646 ~ 57121813 (+)
XLOC_016016 NA non-coding downstream 855913 58854496 ~ 58855890 (+)
XLOC_016017 NA non-coding downstream 867177 58865760 ~ 58868244 (+)

Expression


Co-expression Network