XLOC_016706


Basic Information

Item Value
gene id XLOC_016706
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 40533963 ~ 40534863 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00033902
ACTGGCTTCACAAAGGAGAACGTGAGGTTGCCGCTTGGGTAAAATGCATGGAGCACATTCTTTCCTGCATGGCTGGACAGTGCTGAGCACATCTGAGTGTAGAGCTGATCAAAGCAGGCATGATTCAGCCCATGCATGTAATGCTATTTAAAGCGCCACACTCGCTTCTCAGATTGAATTGATAGCTAATGAAAATCTGAAGGCATGGAGGAAATGCTTTGATAGACAAATTAAAATTCCTTGAAAAGTGGAATAAGTTGGAAGGAAAACAAGCACAGTGAGAGGCGGCTGTGAGATCTGTTTGATTAAAGTGAGATGCACATGCTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00033902 True 327 lncRNA 0.43 2 40533963 40534863

Neighbor

gene id symbol gene type direction distance location
XLOC_016705 NA coding downstream 322171 40205908 ~ 40211792 (-)
XLOC_016704 NA coding downstream 334183 40198817 ~ 40199780 (-)
XLOC_016703 NA coding downstream 337393 40194067 ~ 40196570 (-)
XLOC_016702 si:ch211-122l24.6 coding downstream 342360 40181633 ~ 40191603 (-)
XLOC_016701 epha4a coding downstream 397939 40067808 ~ 40136024 (-)
XLOC_016707 CR931819.2 coding upstream 10083 40544946 ~ 40545061 (-)
XLOC_016708 CR931819.1 coding upstream 60512 40595375 ~ 40595494 (-)
XLOC_016709 NA coding upstream 88091 40622954 ~ 40712263 (-)
XLOC_016710 NA coding upstream 231738 40766601 ~ 40769804 (-)
XLOC_016711 BX005042.1 coding upstream 251802 40786665 ~ 40804968 (-)
XLOC_016700 NA non-coding downstream 500905 39830685 ~ 40033058 (-)
XLOC_016699 NA non-coding downstream 706452 39826704 ~ 39827511 (-)

Expression


Co-expression Network