XLOC_016699



Basic Information


Item Value
gene id XLOC_016699
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 39826704 ~ 39827511 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00033894
CATTGTGGTCATCTCCTCTTTGCTTTTCAAGTCCATcgacatacatggtgagctaataggacaaactggttacagcaggAAATCGGTCTTTACGAAAaatgagcctatgttggatatTTGTATAACTGGGACATGGAGCATTTCCAGAAGATTGTGAAGTTGCAGTCATGAGAAAAGTCTGGTGGCCAAATGTGCTCACACCTGTTCTGGTGCAGCATTTGCTTAAGAGTGTGATTCTGTTCCAGGACTGCTTCATCCTCAATATCACATTACTGGATTGCATTCAAGACAGTTTGTGCTTTTTGGAAATCATGAGATATGTTGACTGAAGAAGTGtctgaattaaaaaaatgacACGAGAGCACATATAACATCCAAGAGAAACATTCAGCAAAAGCTGCTCTTTTACAgcagaataaaaaatacttttagcattttgtattttgctttgttttgtagtAAAGGTTTTCAATTATTAtgcataaaaaaagaacaaattcgCTAAATTTACCAACAGAATACTGGtatattttcctgtttttgttaaattatttttccCGCCTAACTGAACATACATTGTTGCTTTAATAACTCTAAAGTTGTTTATATATTCCCAAGGAATATATAACAGATCaaggttttttttgttgttgttgttgtttgtttggct

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00033894 True 670 lncRNA 0.35 2 39826704 39827511

Neighbor


gene id symbol gene type direction distance location
XLOC_016698 slc25a36a coding downstream 67645 39731284 ~ 39759059 (-)
XLOC_016696 spsb4a coding downstream 150875 39584066 ~ 39675829 (-)
XLOC_016697 NA coding downstream 214240 39610321 ~ 39612464 (-)
XLOC_016695 cbln7 coding downstream 268061 39549376 ~ 39558643 (-)
XLOC_016694 BX248328.1 coding downstream 455777 39370811 ~ 39370927 (-)
XLOC_016700 NA coding upstream 3174 39830685 ~ 40033058 (-)
XLOC_016701 epha4a coding upstream 240297 40067808 ~ 40136024 (-)
XLOC_016702 si:ch211-122l24.6 coding upstream 354122 40181633 ~ 40191603 (-)
XLOC_016703 NA coding upstream 366556 40194067 ~ 40196570 (-)
XLOC_016704 NA coding upstream 371306 40198817 ~ 40199780 (-)
XLOC_016681 NA non-coding downstream 1632225 38192959 ~ 38194479 (-)
XLOC_016680 NA non-coding downstream 1681003 38144162 ~ 38145701 (-)
XLOC_016662 NA non-coding downstream 2011331 37813663 ~ 37815373 (-)
XLOC_016705 NA non-coding upstream 378397 40205908 ~ 40211792 (-)
XLOC_016706 NA non-coding upstream 706452 40533963 ~ 40534863 (-)

Expression



Co-expression Network