XLOC_016801 (eif4e2)


Basic Information

Item Value
gene id XLOC_016801
gene name eif4e2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 45116819 ~ 45135618 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032924
CACATTGTGGTGCGCGCGCCCGCAGCCACCACTAGCGCGCGCCGCCGTTGCTGCGGAATTGACGGGCTGCCGACCGTCGGCGCGAGAGCGGATCCAGACACTCTTCTAGAAAATAATGAACAACAAATTTGACGCCCTGAAAGATGATGACAGTGGAGATCACGACCAGGACAACAGCTCACCGAAAGACGGGGAGAAGGAAAAAAATGATGAAGAGGACAAAGAAGCAAACACTACAAAGAGAAAGGCAGTGGTCCCGGGAGCTGGTGAACACCCTCTTCAGTATAACTACACCTTCTGGTATTCTCGACGCACACCAGGACGTCCGGCCAGCACACAGAGCTATGAACAGAACATTAAACAGATTGGCAGCTTTGCTTCGGTGGAGCAGTTCTGGCGTTTTTATAGTCACATGATCCGACCGGGTGATCTGACTGGTCACAGTGATTTCCACCTGTTTAAGGAAGGAATCAAACCCATGTGGGAGGATGATGCTAATAAGAGTGGTGGTAAATGGATCATTCGGCTCCGGAAAGGCCTGGCGTCTCGCTGCTGGGAAAATCTGATCCTGGCCATGCTTGGCGAACAGTTCATGGTGGGCGAGGAGATCTGTGGCGCCGTCGTGTCCGTTCGCTTCCAGGAGGATATCATTTCCATCTGGAATAAGACGGCCAGCGATCAGGCCACCACTGCTCGCATTAGAGACACTTTACGCAGAGTCCTCAACCTGCCTCCTAATACTATAATGGAGTACAAAACACACACCGACAGCATCAAAGCTTGGGAGGATTTCCATGGTCTAGTGAACGCAAGTGGAGGACGCTAGTATTTtcacccagtgtgtgtgtgtgtgagatgATCTATGAACTTTATTTCCCCAATGAAGAGGTCATTTTCTGATCACACCAACCTGAAACTGagctgtttttaaaagaaaaaaatgaaagggacGCCACAAAATGGGGCTCAGCAtgggttatttttaatattgaagACTTCTGGCTTTTTATAAACGTCCAAACAACACCTGAATAAGGAGGAGGAGGAACCAAAACATCAATGGGTGAATGATTTCCAGTCAGCCATCTTTCAGACAGATAGCGGGACCACACAAACTAAAGGCTGGAAACTGCCACATtttccaaaaacaacaacaacaaaaaaagatgaaTTCTTACATTTACCTGACCGATCATCTTAAAAACTGAAGAGAGTTCATTTAGGTCACATTATTATCCAGTGGAGTCGCAGGCTGATGGGGATATTTTACTATAGTGCAGTATTTTAGCTACAGTGTCGAGTTGTTTTAACATAGAACTGttgtacaaaaaaaacaattatatttgtaaaCATATTTGGAGAGCTGTATAATAGCggacttgttttttttcttctttctcctGAGCTGAAGGAGTGTAAACCCAAAGGACAGTGCCCTTTATGGATGGGCACGGCGCTGCGTGATTCACTGTGCCTGGCCTTCATAAACACTGACTTTACAATCACTATTCAGACATGCTAACTAACAAACACTGATATATCTGGAGTTACTGGAGGCTGTGGATCAACACCTACTTTATACTGCCTGGACTTCAGTGCTGGTGCTGGACAGTTGTATTCGaggtacatt

Function

symbol description
eif4e2 Predicted to enable RNA 7-methylguanosine cap binding activity and translation initiation factor activity. Acts upstream of or within angiogenesis. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 4F complex. Is expressed in brain; digestive system; optic cup; and somite. Orthologous to human EIF4E2 (eukaryotic translation initiation factor 4E family member 2).

GO:

id name namespace
GO:0006412 translation biological_process
GO:0006413 translational initiation biological_process
GO:0001525 angiogenesis biological_process
GO:0016281 eukaryotic translation initiation factor 4F complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0000340 RNA 7-methylguanosine cap binding molecular_function
GO:0005515 protein binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0003743 translation initiation factor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050327-59 Predicted to enable RNA 7-methylguanosine cap binding activity and translation initiation factor activity. Acts upstream of or within angiogenesis. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 4F complex. Is expressed in brain; digestive system; optic cup; and somite. Orthologous to human EIF4E2 (eukaryotic translation initiation factor 4E family member 2).

Ensembl:

ensembl_id ENSDARG00000038585

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032924 True 1630 mRNA 0.46 8 45116819 45135618

Neighbor

gene id symbol gene type direction distance location
XLOC_016800 CU929150.3 coding downstream 17315 45099174 ~ 45099504 (-)
XLOC_016799 NA coding downstream 18421 45095017 ~ 45098398 (-)
XLOC_016798 CR293505.1 coding downstream 42909 45073794 ~ 45073910 (-)
XLOC_016797 NA coding downstream 49633 45052537 ~ 45067186 (-)
XLOC_016796 NA coding downstream 71299 45044482 ~ 45045520 (-)
XLOC_016802 capn10 coding upstream 3852 45139470 ~ 45154622 (-)
XLOC_016803 CR407590.2 coding upstream 37220 45172838 ~ 45191319 (-)
XLOC_016804 dre-mir-181b-1 coding upstream 66605 45202223 ~ 45202331 (-)
XLOC_016805 NA coding upstream 89504 45225122 ~ 45227245 (-)
XLOC_016806 si:dkey-13n23.3 coding upstream 194834 45330452 ~ 45331115 (-)
XLOC_016808 NA non-coding upstream 277983 45413601 ~ 45415299 (-)
XLOC_016809 NA non-coding upstream 292040 45427658 ~ 45448291 (-)
XLOC_016811 NA non-coding upstream 420562 45556180 ~ 45556664 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000152_02006897_02010593 EIF4E2 coding CI01000152 null 2006352 ~ 2010593 (-)