XLOC_016818 (si:ch211-226f6.1)


Basic Information

Item Value
gene id XLOC_016818
gene name si:ch211-226f6.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007113.7
NCBI id CM002886.2
chromosome length 59640629
location 47038403 ~ 47039762 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00032946
GccattttcaaaacaaaagccGCGGTTTTCAAGTTATGATGACGTttgttatacattatatttagttACACATTATACTTGGTTACAAAGCGTTGGTTAATTTAAGTTGACTTTTCTCGTTAGCAACACGCTAAAGTTTTGTTCACTCCGTCCGAGGGCAGCGTCtcatgaacagacagacagaaatgtcAGAGCTTGGTCTAGGACGAAAACGAAGAATTGACATCTGGTCAAACTTCACATATGACAACAAGGACAACAAGAGCGTCTGTAAACCATGTGGAGTAAAAATCGCTGGGAAAAACACCACCAACTTGAAGCGACATTTACAGACGGTTTATCCAGAAATCCACACCAAGATACAGAAGATGTCTGATGACCATGGGCCAGGTGGAAATAAAGCTAGTGATGCTACTAGTACAACACAGCAGCAGGCCATCTCAGATTTCCTAAGGTCTTCAAAGTACAAGACTGAATCAAAGGAACAACAGACCAAGGAGCAGGCCATAGCTAGATGGATAGGACGGACAGGTTTACCACACACAAAAATTGAGGATGAGGACTTTGTGCTAATGATGGGGATGATAGATGGGAGACTAACAGTTCCAAAGAAAACTAAAATTAgcaatttaattaaaacactgtatgaatgctgtactTTATCTTGAAAGAATGTCATATGCGTTTCATATAATTCAAGGACAATGCATATCTTTTTCAGGGAGCATGTATATTGTTCAGGGAGAGCAGGTCTTGTGgttattttttgtgaaaaagactCATGTTTCTgacatgtaataaacatttttttattacaacaatTAGATATGTGCCTGTATTCTATATATGCttccatatattatattatacttacaATTACATGAATTATGGAGAAAAATCTGCTAATATTTGGTCTACTAAAACTAGACTAAGACTAATAGACTTAAGACTAAACTAAGACTAAAACTCTTATGATATTTAGTCAACTAAACTAGACTAAGACTAAAAGATTTCAGATGA

Function

symbol description
si:ch211-226f6.1 Predicted to enable DNA binding activity and metal ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094038

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00032946 True 1020 mRNA 0.36 2 47038403 47039762

Neighbor

gene id symbol gene type direction distance location
XLOC_016817 NA coding downstream 172841 46863035 ~ 46865562 (-)
XLOC_016816 NA coding downstream 1004292 46019361 ~ 46034111 (-)
XLOC_016815 CU467828.1 coding downstream 1293424 45744863 ~ 45744979 (-)
XLOC_016814 fam102ba coding downstream 1347275 45665493 ~ 45691128 (-)
XLOC_016813 prpf38b coding downstream 1374458 45655294 ~ 45663945 (-)
XLOC_016819 NA coding upstream 50983 47090745 ~ 47099661 (-)
XLOC_016820 FP101908.1 coding upstream 220875 47260637 ~ 47260753 (-)
XLOC_016821 NA coding upstream 302009 47341771 ~ 47344826 (-)
XLOC_016822 BX085193.2 coding upstream 305279 47345041 ~ 47348782 (-)
XLOC_016823 NA coding upstream 317559 47357321 ~ 47367152 (-)
XLOC_016811 NA non-coding downstream 1481739 45556180 ~ 45556664 (-)
XLOC_016809 NA non-coding downstream 1590112 45427658 ~ 45448291 (-)

Expression


Co-expression Network