XLOC_017176


Basic Information

Item Value
gene id XLOC_017176
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 11980778 ~ 11985215 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036375
ATCTCACATTGGCAGATCTGTTTCCCCATAATAGGTCAACTACGTACCAAATGCAGTTGGTGTTTCTTTACAGGGAACAAGACTTTAAGTACTTTGGTCAAGAATTGGTCATGAGGTGCTTAGtcaaAGTCCTTAAAGACCTTGAGAGTACAGGTGTAAATTTTCCAGATGGACTGAATGTAAAAGCAATCTTGCTGGCAATAGCTGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036375 True 208 lncRNA 0.40 2 11980778 11985215

Neighbor

gene id symbol gene type direction distance location
XLOC_017175 NA coding upstream 64491 11911552 ~ 11916287 (+)
XLOC_017174 si:ch211-155o21.4 coding upstream 176783 11800063 ~ 11803995 (+)
XLOC_017173 NA coding upstream 244550 11730319 ~ 11736228 (+)
XLOC_017172 NA coding upstream 336430 11643082 ~ 11644348 (+)
XLOC_017171 NA coding upstream 909613 11069616 ~ 11071165 (+)
XLOC_017177 BX322618.1 coding downstream 218547 12203762 ~ 12208117 (+)
XLOC_017178 NA coding downstream 611793 12597008 ~ 12605833 (+)
XLOC_017179 NA coding downstream 657525 12642740 ~ 12682140 (+)
XLOC_017180 FAM177A1 coding downstream 717708 12702923 ~ 12722351 (+)
XLOC_017181 BX547930.4 coding downstream 845233 12830448 ~ 12839993 (+)
XLOC_017166 NA non-coding upstream 1490714 10489458 ~ 10490064 (+)
XLOC_017182 BX547930.1 non-coding downstream 922018 12907233 ~ 12909125 (+)
XLOC_017183 BX547930.3 non-coding downstream 983699 12968914 ~ 12974721 (+)

Expression


Co-expression Network