XLOC_017183 (BX547930.3)


Basic Information

Item Value
gene id XLOC_017183
gene name BX547930.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 12968914 ~ 12974721 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00034236
atattagttttttagctccgaattcaatctgattccaatttaaatgatcctaaaatttaaattatatttctaattgtaagaacggatcacattcatcatttatgatttaatttagagttttgatattttctgaggtccgatattctaattgtacgttcattagggaccaacatCGCTCAGAGTTCCACACCCCGGGTTTGCGCATCTTCTCACGGACAATATTGTCgacactctgaaaatagtcagaggatgcaggattaactatatTTAAATAAGCTGGTCGCATTAACACTTACCTAGTCTTAAAAAAACAGATCCTTAGCCAAGCCCATACAACTTGCTACTTCCAGTGGTTGAAtgattaaaaggtctacatgttatcggcACACTATGGCTAACAATAATCAAATGCGCCTATTAATCAATTCAATTATGCCACAATAAAGGTAATGAAGACTCCTctaatctactggatacaatgaaatcgcaaaactccagaattaatcaaaacttaacattttatttgtcaggtaaaattgtattctgccaattacataataaatcatcaggaagccaattcagagatgagactgtaacaaaacaacatccattaatcaaagataaatcaaagagttaagagatgcatacctgaccagagaaatACATTGCAACATAAGTtctcagagatgctgcaatggggtgtctttttacaagatctcccccc

Function

GO:

id name namespace
GO:0015349 thyroid hormone transmembrane transporter activity molecular_function

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096657

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00034236 True 724 lncRNA 0.35 2 12968914 12974721

Neighbor

gene id symbol gene type direction distance location
XLOC_017182 BX547930.1 coding upstream 59789 12907233 ~ 12909125 (+)
XLOC_017181 BX547930.4 coding upstream 128921 12830448 ~ 12839993 (+)
XLOC_017180 FAM177A1 coding upstream 246563 12702923 ~ 12722351 (+)
XLOC_017179 NA coding upstream 286774 12642740 ~ 12682140 (+)
XLOC_017178 NA coding upstream 363081 12597008 ~ 12605833 (+)
XLOC_017184 BX547930.2 coding downstream 26347 13001068 ~ 13003183 (+)
XLOC_017185 dtl coding downstream 166687 13141408 ~ 13174165 (+)
XLOC_017186 ppp2r5a coding downstream 200658 13175379 ~ 13311918 (+)
XLOC_017187 enpp1 coding downstream 428560 13403281 ~ 13521010 (+)
XLOC_017188 sytl3 coding downstream 558823 13533544 ~ 13565720 (+)
XLOC_017177 BX322618.1 non-coding upstream 760797 12203762 ~ 12208117 (+)
XLOC_017176 NA non-coding upstream 983699 11980778 ~ 11985215 (+)
XLOC_017189 NA non-coding downstream 666224 13640945 ~ 13665051 (+)
XLOC_017194 NA non-coding downstream 1040091 14014812 ~ 14041218 (+)
XLOC_017196 NA non-coding downstream 1169355 14144076 ~ 14147484 (+)
XLOC_017198 NA non-coding downstream 1513036 14487757 ~ 14623918 (+)

Expression


Co-expression Network