XLOC_017732 (CU550702.1)


Basic Information

Item Value
gene id XLOC_017732
gene name CU550702.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 52299192 ~ 52303074 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035082
GTTTGATTTGGTGTTCAGTGGTGTAGATGGTGTTTGACAGTCAGCGAACAGTCATGCGTTTTCAGTCAAAAATACAGCGTTTACAGCACGATATGGATTACAATATTCTGGAGAGAATGATTACAAGAGATTCACCAGAGTTCAGGAGCCGCGGTCGCGCTGGAGGAGCGTCCGAACAGAGAGCTTCATCTGCGGCCGTCGTGGAGAACCAGACAGCAGAGATGCAAAGACGAGGACGGAGGAAGACAGGCGTTCTTTCATTCTTCCGGAAAATGGGAAGAGCTATCCATAAGCTTTGCTGTATGGATGCAGCAGCAACATCTAGAGTGGACCACACTGACCCATCTGGTAGCGCTCGTGCTGTCGCCTCAGAATCGAGAGAACGGACTAGAAAGATCTACCTCAAGAAAGATTGCAGCAAAGTCATCTTGAGAATCGTCAAGGGCACCCCAGGGTCCCCGGATCCGTGTGGGGTCTGTGTTGTCTCCATTGACGTGGACCAACCTGGGATCTCCAGTGTGTCTGTTGACCCGGGACCTAATGGATTCTACTCAGATTCTTTTAGTCCGGGTCCACCTGGAGTCCTCCGCTTGTCCCTCGTCCTATGTCCATCTGGGGTGTTCAGTGTGTCTCTTAATGCTCGTCCATCTCGAGGCTGCAGGGTGTCTGTTGATCCCGGTTCGTCTGGGTTCTTCAGTGTGTCCTCTTATCCGGGTGCGTCTCGGGACTTCAGTGTATCTGGTAACCCGGATGCCTCTGGAGGCTGCAGGCTGTCTGTGGATACGGGTCTGTTTGGGGGCTGCGCAGTGTCTGCTGCTCCGGGTCCGTCTGATTGCGGCATGTCAGCTGCTCCGGGTCCGTCTGATTGCGGCATGTCTACTGCTCCGGGACCGTCTAATTGCGCAATGTCTGCTGCTCCAGATCCCAGTGATTGCAGCATGTCAGCTGTTCCAGATCTGTCTGATTGCAGCATGGCTGCTGATCTGGGTCTGTCTGATTGCGGCATGTCTGCTAATCCGGGTCCGTCTGGTTGCACCAAGCCTGCTTATCCGGGTCCGTCTGGTTGCACCAAGCCTGCTGCTCCGGTACCGTCTGGTTGCACAATTCCTGCTGATCCAGGTCTGTCTGGTTGCATTACGTCTGCTGCTCCGGCTCCTCACTGGTGGATCAGCAGTTCCCGCCCGCCAAGCAACAGAACCATTCAGATGTTGGTGATCGAGTATCCGGATGGCTTCATACCGCCGGCAGACCTGACTCTCTATGTGTTGTGTGTTGTTGTAATTCTTTTATTGCATGTAGTGTTTGTCTGCATCTGAACTGTAATAAATTGTGTTTGAATACACTT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096702

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035082 True 1345 lncRNA 0.53 3 52299192 52303074

Neighbor

gene id symbol gene type direction distance location
XLOC_017729 NA coding upstream 63752 52092585 ~ 52235440 (+)
XLOC_017731 NA coding upstream 90821 52203395 ~ 52208371 (+)
XLOC_017730 NA coding upstream 96051 52199291 ~ 52203141 (+)
XLOC_017728 CU179729.1 coding upstream 216692 52064027 ~ 52082500 (+)
XLOC_017727 NA coding upstream 238094 51935303 ~ 52061098 (+)
XLOC_017733 arhgap39 coding downstream 86784 52389858 ~ 52447533 (+)
XLOC_017734 tsta3 coding downstream 155691 52458765 ~ 52488233 (+)
XLOC_017735 GFUS coding downstream 189118 52492192 ~ 52525680 (+)
XLOC_017736 pycr3 coding downstream 225970 52529044 ~ 52544771 (+)
XLOC_017737 eef1db coding downstream 243112 52546186 ~ 52582645 (+)
XLOC_017739 NA non-coding downstream 295400 52598474 ~ 52638326 (+)
XLOC_017740 NA non-coding downstream 367785 52670859 ~ 52671192 (+)
XLOC_017742 CU207296.1 non-coding downstream 616782 52919856 ~ 52919986 (+)
XLOC_017743 NA non-coding downstream 641049 52944123 ~ 52949831 (+)
XLOC_017744 NA non-coding downstream 832362 53135436 ~ 53152423 (+)

Expression


Co-expression Network