XLOC_017846


Basic Information

Item Value
gene id XLOC_017846
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 3326411 ~ 3326625 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00036443
AAGACTATACTTTCAGGGATCATTTCTATAGTTTCTCACTAGGAAATGTGTTTCGAAAGTGTTGTGGCTCCCAAACCGTGATGAAGAGTATTGATGCTCTTTTCTAAGCGTGAATCTGGTGTAGAGACATGGTTTGTCTCATATGCTCTACACTGTTGATGACTGCTCCTGACTGTTTAACACAGTTTTGGAGGAAAAGAGCATGAACTGAGCGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00036443 True 215 lncRNA 0.41 1 3326411 3326625

Neighbor

gene id symbol gene type direction distance location
XLOC_017845 CU570797.7 coding downstream 750 3325446 ~ 3325661 (-)
XLOC_017844 CU570797.4 coding downstream 1713 3324483 ~ 3324698 (-)
XLOC_017843 CU570797.13 coding downstream 2629 3323566 ~ 3323782 (-)
XLOC_017842 CU570797.6 coding downstream 3591 3322604 ~ 3322820 (-)
XLOC_017841 marcksa coding downstream 6675 3312859 ~ 3319736 (-)
XLOC_017847 CU570797.5 coding upstream 765 3327390 ~ 3327605 (-)
XLOC_017848 CU570797.3 coding upstream 1729 3328354 ~ 3328569 (-)
XLOC_017849 CU570797.12 coding upstream 2888 3329513 ~ 3329727 (-)
XLOC_017850 CU570797.10 coding upstream 3851 3330476 ~ 3330691 (-)
XLOC_017851 NA coding upstream 4832 3331457 ~ 3331671 (-)
XLOC_017928 CU539064.1 misc upstream 6726780 10053405 ~ 10053701 (-)
XLOC_017833 NA non-coding downstream 347327 2975705 ~ 2979084 (-)

Expression


Co-expression Network