XLOC_017842 (CU570797.6)


Basic Information

Item Value
gene id XLOC_017842
gene name CU570797.6
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 3322604 ~ 3322820 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035252
AAGACTATACTTTCAGGGATCATTTCTATAGGTTCTCACTAGGAAATGTGTTTTGAAAGTGTTGTGTCTCCCAAACCGCGATGAAGAGTGTTGATGCTCTTTTCTAAGCGTGAATCTGGTGTAGAGAAATGGTTTGTCTCATATGCTCTACACTGTTGATGACCGTCCCTGACTGCTTAAAGCAGTTTTGGAGGAAAAGAGCCTGAACTGAGCGGCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110897

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035252 True 217 snoRNA 0.43 1 3322604 3322820

Neighbor

gene id symbol gene type direction distance location
XLOC_017841 marcksa coding downstream 2868 3312859 ~ 3319736 (-)
XLOC_017840 si:ch1073-412h12.3 coding downstream 12587 3290188 ~ 3310017 (-)
XLOC_017839 rps6kc1 coding downstream 46265 3238879 ~ 3276339 (-)
XLOC_017838 spint1b coding downstream 84494 3218893 ~ 3238110 (-)
XLOC_017837 si:ch73-212j7.3 coding downstream 156436 3162423 ~ 3166168 (-)
XLOC_017843 CU570797.13 coding upstream 746 3323566 ~ 3323782 (-)
XLOC_017844 CU570797.4 coding upstream 1663 3324483 ~ 3324698 (-)
XLOC_017845 CU570797.7 coding upstream 2626 3325446 ~ 3325661 (-)
XLOC_017846 NA coding upstream 3591 3326411 ~ 3326625 (-)
XLOC_017847 CU570797.5 coding upstream 4570 3327390 ~ 3327605 (-)
XLOC_017928 CU539064.1 misc upstream 6730585 10053405 ~ 10053701 (-)
XLOC_017833 NA non-coding downstream 343520 2975705 ~ 2979084 (-)
XLOC_017831 NA non-coding downstream 596674 2715949 ~ 2725930 (-)
XLOC_017826 BX072559.1 non-coding downstream 823663 2497521 ~ 2498941 (-)
XLOC_017825 NA non-coding downstream 840783 2478216 ~ 2481821 (-)
XLOC_017824 NA non-coding downstream 897244 2416455 ~ 2425360 (-)

Expression


Co-expression Network