XLOC_017837 (si:ch73-212j7.3)


Basic Information

Item Value
gene id XLOC_017837
gene name si:ch73-212j7.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007131.7
NCBI id CM002904.2
chromosome length 55201332
location 3162423 ~ 3166168 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00035245
GAGATTGCCAAACACTTTGATCCACAGGAGAATGGATACGAGGTGGTGGAGGAGGCCATATACACCATGACTGGTGTTGCGTGGTATATAAATGACATGAAGAGAAAACATGAGCATGCAGTACGTCTTCAGGAGGTCCAGTCTCTGCTTATAAACTGGAAAGGGCCTGACCTGACTACATATGGAGAGCTGGTTCTAGAGGGCTCTTTTCGCATCCATCGAGCGAAGAATGAGCGCACACTCTTTCTCTTTGACCGCATGCTCCTCATCACCAAACGAAGAGGAGAACATTATGTCTATAAGACCCACATCTCGTGCTCCACGCTAATGTTGATTGAGAGCGCCAAGGATTCACTATGCTTTAGTGTTACTCATTACAAGCATCCCAAACAGCCACATACTGTCCAGGCTAGAACGTTGGAGGAGAAGAAATTATGGGCTCATCATATTAAACGTCTCATTATAGAAAACCATCAGGCTGTGATACCACAAAAGgcaAAGGAAGCCATTTTAGAGATGGATTCAATATacAAAAAGTATAGGTACAGCCCTGAAAGACTCAAAAAGTCTGTGTCATGCCAGTCAGAGGAATTTTCCAACTTTAGACAAGGCCTGAAGCAGCCAGGTGGGTGCCTTTTgtcagaaaatataaatattgtacaaatttcacaatttttaatGATCACTTCTAACTTCCAACAGAAGCATCTAAAGAAGCTTTAAAGAGCACTAAAGGTACATTTCTATTAATTCCTAATTCAAAGTaaatcatttcaatgtttgatgACACAGTAattcaggtgaagtttttttttccgtctccgctg

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096613

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00035245 True 827 mRNA 0.41 6 3162423 3166168

Neighbor

gene id symbol gene type direction distance location
XLOC_017836 si:ch73-212j7.3 coding downstream 1736 3145497 ~ 3160687 (-)
XLOC_017835 map3k5 coding downstream 75261 3005472 ~ 3087162 (-)
XLOC_017834 ppil4 coding downstream 158297 2982381 ~ 3004126 (-)
XLOC_017833 NA coding downstream 183339 2975705 ~ 2979084 (-)
XLOC_017832 cdk19 coding downstream 213395 2879700 ~ 2949028 (-)
XLOC_017838 spint1b coding upstream 52725 3218893 ~ 3238110 (-)
XLOC_017839 rps6kc1 coding upstream 72711 3238879 ~ 3276339 (-)
XLOC_017840 si:ch1073-412h12.3 coding upstream 124020 3290188 ~ 3310017 (-)
XLOC_017841 marcksa coding upstream 146691 3312859 ~ 3319736 (-)
XLOC_017842 CU570797.6 coding upstream 156436 3322604 ~ 3322820 (-)
XLOC_017928 CU539064.1 misc upstream 6887237 10053405 ~ 10053701 (-)
XLOC_017831 NA non-coding downstream 436493 2715949 ~ 2725930 (-)
XLOC_017826 BX072559.1 non-coding downstream 663482 2497521 ~ 2498941 (-)
XLOC_017825 NA non-coding downstream 680602 2478216 ~ 2481821 (-)
XLOC_017824 NA non-coding downstream 737063 2416455 ~ 2425360 (-)
XLOC_017843 CU570797.13 non-coding upstream 157398 3323566 ~ 3323782 (-)
XLOC_017844 CU570797.4 non-coding upstream 158315 3324483 ~ 3324698 (-)
XLOC_017845 CU570797.7 non-coding upstream 159278 3325446 ~ 3325661 (-)
XLOC_017846 NA non-coding upstream 160243 3326411 ~ 3326625 (-)

Expression


Co-expression Network