XLOC_000181 (ppp2r2ca)


Basic Information

Item Value
gene id XLOC_000181
gene name ppp2r2ca
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 14283692 ~ 14306838 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000324
TGCAGATGCTCAGCAGCAGTGGTAGTCGAGAAAGACAGGCTAGCGgtatcctctctctctctctccctctctttctctccctccccCTCTTTTTCATCTTTCCTTTCCCTTCACGCACAGgcacgcacgcatacacacacgcgCACTCCGTCACACTGCAGCAGAAGGGAGAGGACGCACCGTGAAGCTGTGAGGCAGTGTTGGCTGAGCGTCAGGACGTGAGCATGTGTGCATGTGACGGGCTGCGTTTCTCCAGCTGACTGAACGATGCCGTGCGGCAGGCCACTCTGCTAGGCCGCAGAAGCATGGGCAAAGCACCGGGGGGGTGGGACAGCACGGATTGGACGGCTCAGCTCCGGACGGGCGCGCTTACGCACTCCGCCGCTTCCGATGGGTGAGGACGGCGAGAGCACCAAAATCAATCACAGCTTCCTCCGAGACTATGTCACTGAAGCTGATGTCATTTCTACAGTGGAGTTTAACCAGACGGGGGATCTGCTGGCCACTGGGGATAAGGGGGGGAGAGTGGTCATCTTCCAGAGAGAGACAGAGTCTAAAGGTGAATCTGAAGAGCTGGGAGAATCGGGTGAGTATAATGTCTACAGCACGTTCCAGAGTCATGAACCGGACTTTGACTATCTGAAGAGTTTGGAAATCGAGGAGAAGATCAATAAGATCCGCTGGCTGCCACAGCAAAACGCTGCTCACTTTCTCCTCTCCACTAACGATAAAACGATAAAGCTATGGAAGGTGAGCGAGAGAGACAAGCGGCCAGAGGGCTACAATCTGAAGGATGAAGAAGGGCGAATAAAGGACATCTCCACCGTGACCTCATTACGGGTGCCAGTCCTAAAGCCCACTGACCTGATGGTTGAAGTGCGACCGAGGAGAGTCTTTGCTAATGGCCACACTTACCACGTCAACTCCATCTCCGTCAACAGCGATGGAGAGACGTATCTGTCAGCCGATGATCTCCGGATCAACATGTGGCACCTGGACATCACAGACCGAAGCTTCAACATTGTGGACATTAAGCCAGCCAATATGGAGGACCTGACGGAGGTGATAACAGCTGCAGAGTTCCACCCACAGCACTGCCATCTGTTTGTGTACAGCAGCAGTAAAGGAACACTACGCCTCTGTGACATGAGAGAGTCGGCACTCTGCGACAGACACTCCAAAATCTTTGAGGAGCCAGAGGACCCAGGCAATCGTTCCTTTTTCTCTGAGATCATATCATCAGTTTCTGATGTTAAGTTCAGCCATAGTGGACGATATTTGCTCACCAGAGACTATCTGACTGTCAAAGTCTGGGACCTCCACATGGAAAAGGGCCCAGTGGAGACATACCAGGTTCATGAATATCTAAGAAGCAGACTTTGCTCTTTGTATGAAAACGACTGCATCTTCGACAAGTTTGAGTGTGTCTGGAACAGCACTGACAGTGTGATCATGACAGGAGCGTATAACAGCTTTTTTCGGATGTTTGACCGCGAGACGGGTCGTGGTGTGACCCTGGAGGCCTGGCGTGAGAGCAGTAAACCGCGTGCAGTGCTGCGAACTCGCCGCGTTTACACCGGGGGTCGGCGGCGACGAGGGGACGTGGGCGTAGACAGTCTGGACTTCACCAAAAAGATTCTGCACATGGCTTGGCACCCGGCTGAAAACATCATCGCCATCGCCGCCACCAACAACCTCTATATCTTTCAGGACAGGGTCAAACCAGAAAACCAGTGTGAAGAGACATAAAAGGGGCCGCAGTTATGCTCTTCACAGGGCCACACATGCATTCAAATCATATCAGATTTATCCTttaaaacacatacatttttggTCCTGCGGAAGCACGGCTTACTCAAAAGTAGACTGATGGAGTTTGCCGATCCAGAAGAGCAGTTATGTATAGCTAATGACTTGATCTGATAACACTTTGGTTAATCACACCGCCAAGAATGTTGCCAATGAGCTGTGGTACGTGGAATTTATGACTGACATCATGATCAGCCAATCCTGGACTCCTTTGATGTGTGGATGGATGTCGATGACCATTTCCTGATTGGCTGCACCAATCTGTGATTGGTGTTCGATTTGGGCTTTTGGTCTAGGAATGAGACTCCTCTGCGTCATGATAACAAGAGTGCTCTGAGCAGTCTTCCTATCACGTGCTTCCCGAAAAATCCAATCCCACAATGCATCTGCTTTACGAGCACTCATTTTGCTTCACATCGACCATTTGTGAATGCCTATACGACCGAATCACTATATCTCGCACTTGGAGGAGGAATAAATTCCAGTACTTGTCTCAAATGTATGCGAAAAAACCTGAAGGATTGATCCACTTCTTCATCTGAACACTGTCTTAACCAGGTTACACCTCACGATGGGTTACATTCACACCTGTATGGTAGGAAAGGTATTGGtcagtctc

Function

symbol description
ppp2r2ca Predicted to enable protein phosphatase regulator activity. Predicted to be involved in peptidyl-serine dephosphorylation. Predicted to be part of protein phosphatase type 2A complex. Predicted to be active in cytosol. Orthologous to human PPP2R2C (protein phosphatase 2 regulatory subunit Bgamma).

GO:

id name namespace
GO:0070262 peptidyl-serine dephosphorylation biological_process
GO:0005829 cytosol cellular_component
GO:0000159 protein phosphatase type 2A complex cellular_component
GO:0019888 protein phosphatase regulator activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-051120-168 Predicted to enable protein phosphatase regulator activity. Predicted to be involved in peptidyl-serine dephosphorylation. Predicted to be part of protein phosphatase type 2A complex. Predicted to be active in cytosol. Orthologous to human PPP2R2C (protein phosphatase 2 regulatory subunit Bgamma).

Ensembl:

ensembl_id ENSDARG00000056797

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000324 True 2428 mRNA 0.50 11 14283692 14306838

Neighbor

gene id symbol gene type direction distance location
XLOC_000180 cxcl8a coding upstream 29526 14253118 ~ 14254166 (+)
XLOC_000179 ank2a coding upstream 125129 14073891 ~ 14158563 (+)
XLOC_000177 NA coding upstream 200593 13997130 ~ 14083099 (+)
XLOC_000178 hpf1 coding upstream 256912 14020445 ~ 14026780 (+)
XLOC_000176 noctb coding upstream 331608 13930625 ~ 13952084 (+)
XLOC_000182 BX530018.3 coding downstream 30373 14337211 ~ 14337313 (+)
XLOC_000183 crmp1 coding downstream 41561 14348399 ~ 14364710 (+)
XLOC_000184 DRD5 coding downstream 65842 14372680 ~ 14373891 (+)
XLOC_000185 fip1l1b coding downstream 75746 14382584 ~ 14404555 (+)
XLOC_000186 chic2 coding downstream 99260 14406098 ~ 14416435 (+)
XLOC_000175 NA non-coding upstream 801183 13478337 ~ 13482509 (+)
XLOC_000173 CT009746.1 non-coding upstream 1280625 13002978 ~ 13003067 (+)
XLOC_000172 NA non-coding upstream 1346603 12924626 ~ 12937089 (+)
XLOC_000171 BX323031.2 non-coding upstream 1430429 12848061 ~ 12853263 (+)
XLOC_000190 NA non-coding downstream 300996 14607834 ~ 14609880 (+)
XLOC_000192 CR847936.5 non-coding downstream 366939 14673777 ~ 14673871 (+)
XLOC_000193 CU138548.10 non-coding downstream 387723 14694561 ~ 14694655 (+)
XLOC_000194 CU138548.1 non-coding downstream 394898 14701736 ~ 14701830 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000300_03924558_03934407 PPP2R2CA, PPP2R2C coding CI01000300 null 3924558 ~ 3935360 (+)