XLOC_018922 (CR759955.2)


Basic Information

Item Value
gene id XLOC_018922
gene name CR759955.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 24423198 ~ 24438842 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00037598
GACCTTTCCAACTGCATTCAGAATAAATTCCCCCTCCACGTATAAATGCAAGCCCAGCAAAACCGATGCCTATACATTAGCATGCAAACTAGCATATTAGACGCTAAAAGGTAACGATGAAAAACACTTTTGCCCTCTACTTAATTTGCATAAGCACTTTCGTTCCTCTTCCTGTTGATTGAAATTGATTTGAATTCGATTGCCGAACACGCCAGTCAGCAACATGTCAGGAAAGCGCACGCTGTTAGCAAAGAGAACGAGTTTGTGTACAGTCTCCattatttcaatttaataaaaagacaaacaaatccCAGCTGGTGTCACCTAAAACATCTCTCTAGTTGCGTGTCACGAGGAGTAATAAGGCTGCTAACAGCATCGGGATGCAGAGATTTCTGGCATGGCGACGGCCTCTCGGGGGGGTCTGACGAACAACAGCTTTTTTCTGCAACTTCATAATGATCTCGGATCTGTGAAACAAACCCCGTATTCTTCTTATTAGTTTTATGTTGTGCTGTAACTGCAACGACCTGCTTGCAAACCGCCGTTTCCCAGATGGCAAACATTTGCTTTGATTGTAGCTGAAGCGAGCAGCCGTTAATGAGACTTTGATGAAGGATATCCAGATGCAGAGGCTTCCTGATGAAGTCGTCTCCACTCTCGTTCCTTCTGCATGTTTGTCTGTCCTCAATATTTCATCTGCTACCCTCCACTGAAAGAACACACACAAGAGTTGGAGCAGCTCCTAGTGGAGGCCTTGAATACAAACACATTTCACCCTCTGTATCTGCAGTACTCGAATTACACACGCCGCCTTAATGCCTACGCTATCTTAATTAGCCATGCTGAATAAACTGAAGCTCGCTGAATGACTTGACACTGGGAAACTCTGAATGAGGCGTTTGGGGTGGTGCTTTTATTCATGCTAAATGTTAGGAAAAGGGGTGAGGAGAGGTCATCCCAATGAAAAGTCAATAAAAGTACATTTCTTGTTCCTTCTTTTCTGTCTCActttccatctctctctctctctttttccgaCTTCAAAAGACACAACACCTGGCTTTGATCCCGAGATGAAAGAGCAT
>TCONS_00037597
GACCTTTCCAACTGCATTCAGAATAAATTCCCCCTCCACGTATAAATGCAAGCCCAGCAAAACCGATGCCTATACATTAGCATGCAAACTAGCATATTAGACGCTAAAAGGTAACGATGAAAAACACTTTTGCCCTCTACTTAATTTGCATAAGCACTTTCGTTCCTCTTCCTGTTGATTGAAATTGATTTGAATTCGATTGCCGAACACGCCAGTCAGCAACATGTCAGGAAAGCGCACGCTGTTAGCAAAGAGAACGAGTTTGTGTACAGTCTCCattatttcaatttaataaaaagacaaacaaatccCAGCTGGTGTCACCTAAAACATCTCTCTAGTTGCGTGTCACGAGGAGTAATAAGGCTGCTAACAGCATCGGGATGCAGAGATTTCTGGCATGGCGACGGCCTCTCGGGGGGGTCTGACGAACAACAGCTTTTTTCTGCAACTTCATAATGATCTCGGATCTGTGAAACAAACCCCGTATTCTTCTTATTAGTTTTATGTTGTGCTGTAACTGCAACGACCTGCTTGCAAACCGCCGTTTCCCAGATGGCAAACATTTGCTTTGATTGTAGCTGAAGCGAGCAGCCGTTAATGAGACTTTGATGAAGGTAAGGCTGTTTGTTATATAATACACCTATATGACACCTACGGAAGTGTACGGCTGCGAGTGTAATCATCCATTCAAGCTGAAATGTGATAAAGTGCAGGGGTTGTCTGTGCATCGAGGGTGTGAAGGTGTCTTTATCAATCTTTCAGGATATCCAGATGCAGAGGCTTCCTGATGAAGTCGTCTCCACTCTCGTTCCTTCTGCATGTTTGTCTGTCCTCAATATTTCATCTGCTACCCTCCACTGAAAGAACACACACAAGAGTTGGAGCAGCTCCTAGTGGAGGCCTTGAATACAAACACATTTCACCCTCTGTATCTGCAGTACTCGAATTACACACGCCGCCTTAATGCCTACGCTATCTTAATTAGCCATGCTGAATAAACTGAAGCTCGCTGAATGACTTGACACTGGGAAACTCTGAATGAGGCGTTTGGGGTGGTGCTTTTATTCATGCTAAATGTTAGGAAAAGGGGTGAGGAGAGGTCATCCCAATGAAAAGTCAATAAAAGTACATTTCTTGTTCCTTCTTTTCTGTCTCActttccatctctctctctctctttttccgaCTTCAAAAGACACAACACCTGGCTTTGATCCCGAGATGAAAGAGCAT
>TCONS_00039169
CTCTACTTAATTTGCATAAGCACTTTCGTTCCTCTTCCTGTTGATTGAAATTGATTTGAATTCGATTGCCGAACACGCCAGTCAGCAACATGTCAGGAAAGCGCACGCTGTTAGCAAAGAGAACGAGTTTGTGTACAGTCTCCattatttcaatttaataaaaagacaaacaaatccCAGCTGGTGTCACCTAAAACATCTCTCTAGTTGCGTGTCACGAGGAGTAATAAGGCTGCTAACAGCATCGGGATGCAGAGATTTCTGGCATGGCGACGGCCTCTCGGGGGGGTCTGACGAACAACAGCTTTTTTCTGCAACTTCATAATGATCTCGGATCTGTGAAACAAACCCCGTATTCTTCTTATTAGTTTTATGTTGTGCTGTAACTGCAACGACCTGCTTGCAAACCGCCGTTTCCCAGATGGCAAACATTTGCTTTGATTGTAGCTGAAGCGAGCAGCCGTTAATGAGACTTTGATGAAGGTAAGGCTGTTTGTTATATAATACACCTATATGACACCTACGGAAGTGTACGGCTGCGAGTGTAATCATCCATTCAAGCTGAAATGTGATAAAGTGCAGGGGTTGTCTGTGCATCGAGGGTGTGAAGGTGTCTTTATCAATCTTTCAGGATATCCAGATGCAGAGGCTTCCTGATGAAGTCGTCTCCACTCTCGTTCCTTCTGCATGTTTGTCTGTCCTCAATATTTCATCTGCTACCCTGTAAGTGCATCATTTTTTACTGTTACAAATGTAACGTTGGTTTAAAGCAAACTTTCTGCACATGAT
>TCONS_00039170
CTCTACTTAATTTGCATAAGCACTTTCGTTCCTCTTCCTGTTGATTGAAATTGATTTGAATTCGATTGCCGAACACGCCAGTCAGCAACATGTCAGGAAAGCGCACGCTGTTAGCAAAGAGAACGAGTTTGTGTACAGTCTCCattatttcaatttaataaaaagacaaacaaatccCAGCTGGTGTCACCTAAAACATCTCTCTAGTTGCGTGTCACGAGGAGTAATAAGGCTGCTAACAGCATGTAAGTCACCGTGAGCCTTATTTCTGTCTTTGAAGTCTTTTTGGCTTGACTTTCCTCTCATCTCTTGTTAGCGGGATGCAGAGATTTCTGGCATGGCGACGGCCTCTCGGGGGGGTCTGACGAACAACAGCTTTTTTCTGCAACTTCATAATGATCTCGGATCTGTGAAACAAACCCCGTATTCTTCTTATTAGTTTTATGTTGTGCTGTAACTGCAACGACCTGCTTGCAAACCGCCGTTTCCCAGATGGCAAACATTTGCTTTGATTGTAGCTGAAGCGAGCAGCCGTTAATGAGACTTTGATGAAGGTAAGGCTGTTTGTTATATAATACACCTATATGACACCTACGGAAGTGTACGGCTGCGAGTGTAATCATCCATTCAAGCTGAAATGTGATAAAGTGCAGGGGTTGTCTGTGCATCGAGGGTGTGAAGGTGTCTTTATCAATCTTTCAGGATATCCAGATGCAGAGGCTTCCTGATGAAGTCGTCTCCACTCTCGTTCCTTCTGCATGTTTGTCTGTCCTCAATATTTCATCTGCTACCCTCCACTGAAAGAACACACACAAGAGTTGGAGCAGCTCCTAGTGGAGGCCTTGAATACAAACACATTTCACCCTCTGTATCTGCAGTACTCGAATTACACACGCCGCCTTAATGCC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117689

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00037598 False 1088 lncRNA 0.44 4 24423198 24438842
TCONS_00037597 False 1236 lncRNA 0.44 3 24423198 24438842
TCONS_00039169 False 789 lncRNA 0.43 2 24423332 24424191
TCONS_00039170 True 908 lncRNA 0.44 2 24423332 24438577

Neighbor

gene id symbol gene type direction distance location
XLOC_018920 cadm1a coding upstream 10771 23953181 ~ 24412427 (+)
XLOC_018921 BX890610.1 coding upstream 186926 24236151 ~ 24236272 (+)
XLOC_018919 BX005227.1 coding upstream 738362 23684720 ~ 23684836 (+)
XLOC_018918 NA coding upstream 1114953 23305526 ~ 23308245 (+)
XLOC_018917 NA coding upstream 1258890 23160137 ~ 23164308 (+)
XLOC_018924 NA coding downstream 17186 24456028 ~ 24501683 (+)
XLOC_018925 anapc13 coding downstream 97391 24536233 ~ 24537061 (+)
XLOC_018926 CR759955.1 coding downstream 108682 24547524 ~ 24547600 (+)
XLOC_018927 BX510932.2 coding downstream 229379 24668221 ~ 24668337 (+)
XLOC_018928 BX510932.1 coding downstream 310820 24749662 ~ 24749779 (+)
XLOC_018914 NA non-coding upstream 1371651 23048537 ~ 23051547 (+)
XLOC_018929 NA non-coding downstream 426307 24865149 ~ 24868912 (+)

Expression


Co-expression Network