XLOC_019010 (si:ch211-57b15.1)


Basic Information

Item Value
gene id XLOC_019010
gene name si:ch211-57b15.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 29179887 ~ 29186128 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00037723
CTTGCCTCAGATAATTTGTTCCTGTAATAATGCTGATGTAGCTGTATCTGTTGGAAGATCTATCATTCTGGTTTGCATAAATGGCCGTTATAACCTTCACACACCATTGCTGACATGCAAACATTGCAATGAGCAATGGACTCCAGGGGTCATTGACTTCGAAAAGAGTGGTTATTGGCCTGCTACCATGCAAGCCCAGACCCTATTCCACCAAGATCTATTTCATTCGTTTGAGGCTATGAAGACAGCAGCTCCAGGAATGTCAGTGAAAGCATTCACAGCACTGCTAGACCAGAGAACAAAGCAGTTTGGAAGAACTGGCAAAGTGAATGCGGATGCTTTTCAGAGAAGCTTTTTGCAATATGTGTACTGCAACTCTGAACAGAACCAACTACTGGGAAAGGAGCCATTTCTCTGTCCAGCCTGTAGCCCTGAAATGGTGGCTGTTTCAGTGGATGGTAACCGAAAACTCTACAGGTTCCAAAAAACAAACCAGAGtcaagagccagggttttttgaAGGAGTTTTTTTAGCCCAAGACTCCATGGTGTCTAATTTTGTTGAGGAAGTCCGTGGTGCAGTCAAGAGTACACCAGGAAAAGCAATGTGTGGGGAATCCCACTGGACAGCAGCAAGAGAGACATCAAAGCAAGCCAACAAGTTGGATGAAGAAGGTGTGGAAATTGCTGTGTGCAGGCATGGATTCCTCCTAAAAGGTCTGAACATGTATAGAGGAGAAATTTTTGCATATCCGATGTATCTCCAAAAAGAGTTCAAAGATGCAAAATTTTTGGCCATGGATGTGACCTGCCGTTATGTGCCATACCTGGAGAAAGTGTCAGAGGCCCTGAGTCATCTTCAACCTCTTCAGAAAATGAGACATTGCTTGTCTGTAATGCATGCCAAAGCCCACAATACAAAATGCGAGATTCTGTGGAATGCAAGGAACCAGGAAGGTGCTGGAACCACACTTGGGGAAGAAGTGGAGCAAGTAAATAGTTTTCTATCCAGATGTGCCCTGACCACAAAATATATGACCAAGTCAGTAAGAACTGATATGCTTACGGTCCATGCAATTGGGTGGAATCAGCGTAAAGAGAATGGACTGCACATTGCCTTGTCTTCTAGATTTAAAAAGACAGTGCAAAAGACCTTGACTGCAACAGAGAATCTGAAAATGATGCAGAATCAATTCCATTGTAGTGATGACGAAGTAAAACAGTGGGTTATGGATGTCAAGCAGTGGGCAAGCAGTGGAAATGCTACAGCCAGTCCTGTTGGTGCTCATGGCTTGCAGTTGTCCATCGAAACGCTCTTTGTGAGCATTTGTCAGAAAAAGCATTATCTTTATAGGCAGAATGATCGGAACAAAAGGCGTCAGAAGATTACTCAAAAGATTGCCCAAGAAAAGAAACGCTTGGTCGCAGAGATCCAGAGATACAACCAGCAACCTAACGCTGACCCTGTGGACACAAACTTAGTTGTACAGCAACTGTCCAACAAAGCAGAAGAGATCATGATCTGGCCTTGGCAGGAACAGAACACAGATGGTGTCAGCATTATCACCAAGAAGAAGCTCTTTGACCAAGTAATGCTTGTCTCACGGCTGACTGAAGAAAGGCAGATCCTTGTAAAAGAGATGATTCAGCACTGTCAGTACCTTAAGGACTCCATAGCCAAGGTCCAGTCACTGATGGCCACTGTTTCAGTGTGGACACAAACAGGAAGCTATCCAAATGGATTCACAGAGGATGGGTCCAAGGGCCTCATGTGTTTACTAAAAAAAAGACTGCAGGACCTCAGACTGAAACAGCAGACTGTAGCATGCACGTATAAAGGTATTCTTGACCCAACTTCTAGCCTGGTAGAAGAGGAGGAAGgggaaatggaggaagaaatggACTGGCAGAATGACCTTAGCtctgaggatgaagatgaagatgaagatgaagatgaggatgatgcAGCAGTGGGGACTCTAGTCACTTGACTTGGTGTTTTTCTTGACTAttttgtgaatgatcacattgttaCTTTTGCTATAACATGCTGATTTACACTGATGTATTTTCAGTAACTATGTTTGTATTGTTACTGTTGTGCACAACGTTTGGTTCTCAAATGTCTGTAAATACTTTCTTATACCTGTATAtatgaaatacaaatttaatttgtcattaaa

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-141210-17 No description available

Ensembl:

ensembl_id ENSDARG00000103260

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00037723 True 2182 mRNA 0.43 13 29179887 29186128

Neighbor

gene id symbol gene type direction distance location
XLOC_019009 CU463029.1 coding upstream 73767 29105998 ~ 29106120 (+)
XLOC_019008 ecscr coding upstream 90959 29077509 ~ 29088928 (+)
XLOC_019007 ppp3ca coding upstream 104072 28958471 ~ 29075815 (+)
XLOC_019006 NA coding upstream 236011 28939863 ~ 28943876 (+)
XLOC_019005 NA coding upstream 352759 28816583 ~ 28827128 (+)
XLOC_019011 adra1ba coding downstream 41096 29227224 ~ 29247942 (+)
XLOC_019012 NA coding downstream 100112 29286240 ~ 29317094 (+)
XLOC_019013 NA coding downstream 111029 29297157 ~ 29328497 (+)
XLOC_019014 CR847571.3 coding downstream 420199 29606327 ~ 29606450 (+)
XLOC_019015 CU855895.2 coding downstream 800668 29986796 ~ 29986896 (+)
XLOC_018999 CR749775.1 non-coding upstream 688128 28491642 ~ 28491759 (+)
XLOC_018996 NA non-coding upstream 1323520 27856092 ~ 27856367 (+)
XLOC_019017 NA non-coding downstream 836805 30022933 ~ 30027629 (+)

Expression


Co-expression Network