XLOC_019021


Basic Information

Item Value
gene id XLOC_019021
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 30184309 ~ 30186321 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039173
ATGCGCCGGTTTGCTGCAGGTGTCAAGACAGAAGCTAATCTGCTCTACAGGATCTTCGTGGTACGTCTTTCCACGTGCATCTTTCAGTGGGATCCAGAAGATGTGGCCGCTCTTCGCCAGGCAAAGGAAGGTGAGCTGGCGGCAAAGAAGACAGGCTGCATCTCAAAAACGGCATTCAGTGCTTGCAAAAACTGGAGGGAGCTAGCACTGCACTGCCGTAGGAGGACCAAGGGTTTGGAGGAGACAACCTGTTTGACTGGAAAGCTGTTGGACCATTTTGAAAGCGAGCATGGGAAGGATACTCTGGGTGTTCCTCTGCTGGACCAAGAACGGATCGAGCAGATATGGAAGGAACAGCAGAAGCATGTACAGTGCATTCAAGACCCTGAGGACTTTCCACTGTACATAAAGACGGGGACCATGAAGAAAGGCGGTGTGGAGCTGTGTTGCTACAGGTGTGCCTGTGGCTCTACATCCTTGGAGTTCTTTCACCTCCACCTAAACTATTATATTCCAGGGACCAGTGCcagtgatgtgcattttcaggcCTATCTCCTTGAGGGCTTGATGCGCTGGAATGATGACTGGATGGAAAGCACCATAAAAGGAGCATCCTCCATACGGTCATATGGCAGTGCCATGAGAGAGGCTGTGGACAGGCTTAGCCGAGCAGTCTAAGGGAAGCCCTGGGATGACCGCTATCACCCTCCTGGAGCAGATACAGGCAAgaaattcattaatttgttattttgaaaGTTATTTATTGAGATTTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039173 True 773 lncRNA 0.50 2 30184309 30186321

Neighbor

gene id symbol gene type direction distance location
XLOC_019020 NA coding upstream 755 30163899 ~ 30183554 (+)
XLOC_019019 prob1 coding upstream 93367 30084823 ~ 30090942 (+)
XLOC_019018 fabp6 coding upstream 136956 30043054 ~ 30047353 (+)
XLOC_019017 NA coding upstream 156680 30022933 ~ 30027629 (+)
XLOC_019016 ttc1 coding upstream 164683 30007566 ~ 30019626 (+)
XLOC_019022 BRD8 coding downstream 8583 30194904 ~ 30236796 (+)
XLOC_019023 zmat2 coding downstream 107243 30293564 ~ 30300049 (+)
XLOC_019024 lcp2a coding downstream 120048 30306369 ~ 30347592 (+)
XLOC_019025 foxi3a coding downstream 164935 30351256 ~ 30352951 (+)
XLOC_019026 CR749164.1 coding downstream 169446 30355767 ~ 30361679 (+)
XLOC_019015 CU855895.2 non-coding upstream 197413 29986796 ~ 29986896 (+)
XLOC_019014 CR847571.3 non-coding upstream 577859 29606327 ~ 29606450 (+)
XLOC_019013 NA non-coding upstream 855812 29297157 ~ 29328497 (+)
XLOC_019039 NA non-coding downstream 1548868 31735189 ~ 31737398 (+)
XLOC_019040 CABZ01006935.1 non-coding downstream 1844315 32030636 ~ 32030752 (+)
XLOC_019041 NA non-coding downstream 1859103 32045424 ~ 32070143 (+)
XLOC_019042 NA non-coding downstream 1891736 32078057 ~ 32099320 (+)
XLOC_019044 NA non-coding downstream 2220442 32406763 ~ 32411647 (+)

Expression


Co-expression Network