XLOC_019562



Basic Information


Item Value
gene id XLOC_019562
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 22325627 ~ 22327636 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00039631
GGTGGGGTAAATGGTAACCTTtctactcctggcacttttggtaAAACTGTCAAGAATAGGCCGGCGATTTCACAACCAGCGCTCATTAGGAGAGGTTTGTGTGTTGatgttaaaaaaaagAAAAACTTCTTGATTGTAGTGGGATGGTACCTTGGACAACTGCCCAACAGGATGAAGAGTTCTTGCCAACAACAGTGAACTACACTAAACTGACAGTTTAAACTTTCAACTCCCTCTTTCTGTTGCCTGTCCAAGCTGAC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00039631 True 260 lncRNA 0.43 2 22325627 22327636

Neighbor


gene id symbol gene type direction distance location
XLOC_019561 gdpd4b coding downstream 503 22311964 ~ 22325124 (-)
XLOC_019560 ompb coding downstream 135908 22188010 ~ 22189719 (-)
XLOC_019559 slc35f2 coding downstream 203315 22115806 ~ 22122312 (-)
XLOC_019558 elmod1 coding downstream 210435 22099300 ~ 22115192 (-)
XLOC_019557 NA coding downstream 243573 22073949 ~ 22082054 (-)
XLOC_019563 skp2 coding upstream 19484 22347120 ~ 22359336 (-)
XLOC_019564 NA coding upstream 34398 22362034 ~ 22375102 (-)
XLOC_019565 CU466287.1 coding upstream 43394 22371030 ~ 22371136 (-)
XLOC_019566 NA coding upstream 57491 22385127 ~ 22399013 (-)
XLOC_019567 il7r coding upstream 101873 22429509 ~ 22435957 (-)
XLOC_019538 NA non-coding downstream 900116 21405218 ~ 21425511 (-)
XLOC_019535 NA non-coding downstream 1146876 21162410 ~ 21178751 (-)
XLOC_019534 NA non-coding downstream 1166232 21157734 ~ 21159395 (-)
XLOC_019531 NA non-coding downstream 1362438 20958898 ~ 20963189 (-)
XLOC_019596 NA non-coding upstream 787708 23115344 ~ 23132318 (-)
XLOC_019597 NA non-coding upstream 818655 23146291 ~ 23154522 (-)

Expression



Co-expression Network