XLOC_019604 (igsf9bb)


Basic Information

Item Value
gene id XLOC_019604
gene name igsf9bb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 24703188 ~ 24865454 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00038603
ATGATTTGGTATGTGGCCACTTTGATAGCAAGTGTATTCAGCACCAGAGGAACAGCTGCTCAAGGTGCCCACGGAGTCAGAGAGGAGCCCCAGTTTGTGACGTCCCGCGCTGGGGAGACTGTGATTCTGGGATGTGACGTAGTTCACCCACTCAACGGCCAGCCCTACGTGGTGGAGTGGTTCAAGTTTGGAGTTCCCATCCCCTTCTTCATCAACTTCCGCTTCTACCCTCCCCATGTGGACCCCGAGTACGCCGGCCGAGCCAGCCTGCATGGCAAGTCATCTCTACGTATTGAGAGGGTTCGATCAGAAGACCAGGGCTGGTACGAGTGCAAGGTCCTGATGCTGGAACAACAGTACCACACCTTCCACAACGGCAGCTGGGTGCACCTCACTGTCAATGCTCCTCCGACGTTCACGGATACGCCGCCGCAGTATGTAGAGGCCAAAGAGGGTGGCAGCATCACTCTAAGCTGCACAGCGTTCGGCAATCCCAAACCTTCAGTCAGCTGGCTGAGAGAGGGCAACCCCGTACAGGACAGCACCAAGTACAAGGTGAGTGATGGCAGTCTGACACTGGTTTCCATCAGCCGTGAGGATAGGGGTGCGTACACATGCCGGGCATACAGCGAACAAGGAGAGGCAGTTCACACCACACGCCTGCTCGTCCAAGGACCCCCATTTATTGTCTCACCGCCAGAGAACATAACCGTAAACATTTCCCAGGATGCATTCTTCACTTGTCAGGCCGAGGCTTACCCTGGCAACCTAACATACACCTGGTTCTGGGAGGAAGATAACGTCTTCTTCAAGAATGATCTGAAGCGCAGAGTGAGTATTCTGATCGATGGTTCACTCATCATCTCCCAGGTGAAACCAGAGGATGCTGGGAAATACACCTGCAGTCCGAGTAACAGCCTCGGCCGCCCACCTTCAGCATCAGCGTACCTGACAGTGCATTACCCTGCCCGTGTGATAAACATGCCGCCCGTTATTTACGTGGCCATTGGACTGCCGGGGTACATCCGCTGCCCGGTGGATGCCAACCCGCCTGTCACTTCAGTGAAGTGGAAAAAAGACGGCCTGCCTCTGCGGATAGAGAAGTACCCTGGTTGGAGCCAAATGGAAGATGGGAGCATTCGAGTGTCTGAGGTGACAGAGGACTCTCTCGGCACCTACACCTGCGTGCCTTACAATAGCCTCGGTACCATGGGACCGTCCCCTCCCGCCCCCCTGGTGCTAAAGGATCCACCCAAATTTTTGGTGGTTCCTGGAGGGGAGTACAGGCAGGAGGCTGGTCGAGAGCTGGTCATCCCCTGCGAGGCAGAAGGAGACCCATTCCCCAACATTACATGGAGAAAGGTAGGGAAGCCCAGCAGAAGCAAGCACAACGTCCTACCGAGAGGCAGCTTACAGTTCAAATCTCTCAGCAAGGAGGACCACGGGGAGTGGGAGTGTGTCGCCTCCAATGTCGCCACGAGCATCACTGCCAGCACGCACCTCCTAGTAATCGGCACAAGCCCACACGCCCCCGCCAAAGTCCACGTTACGGTCTCGACGACCTCGGCCAATGTCTCGTGGGATTCCAGTTACGATGGCGGCTTTGAGCAGACATTCTCAGTCTGGGTGAAGAGGGAGCAGTTGGGACCGCATGACTGGCTGTCCATGCCTGTGCCCAGCGGACAGCACTGGCTCCTGGTGCAAGGTCTGGAGCCCGAGACGGCCTACCAATTCAGCGTCCTGGCCCAGAACAAGCTGGGAACGGGCCCGTTCAGCGAGGTCGTCACTGTGAACACACTAGTATTTCCTATAAGTACCCCAGAACCACTGGTGCTGCTTACCCCACCACGGTGCCTCACAGCCAACCGGACACAGCAGGGAGTCCTGCTCACATGGATCCCTCCAGCCAATCACACGTCGCCAATCGATCACTACATCATGGATTTCCGCCTTGGGGAGAGATGGGATGTTCTTGATGATGCAATTCCTGCTGGAGAGACTGAGATCTTGGCAAGAGACCTGATTCAGGAGGCCTGGTATGAGTTCAGAGTGATGGCGGTTATGGAGGACCTTGTCAGTGAGCCCAGTAATGTAGTGGGAGTCTCTAGCACAGACTACTTCCCACCGCCTGAGGTGCCAGACGAGGGCCTGGCGCGGCCGGTGGTGGCAGGCATTGTGGCCACCATCTGTTTCCTGGCAGCCGCCATCCTCTTCAGCACGCTAGCAGCCTGTTTCGTCAACAAACAGAGACGGCGTAAGCTCAAGAGGAGACGAGatcCCCCTCTGTCTATAACACACTGCAGAAAGAGTGTGGAGACTCCGTCATCATCTGGAAAGATTAGTCCAGAAAGCATTCGCTCAATAGGACCCCCTTCAGAGTCTTCAGAGGATGGTTTACGAGCTAAGAAGTTTCCTCAAAGTCCTGCCAAGGAGGAGCTTTCCTTATACAAGAAGACCAAGAGAGCAATAATTAGCAAGAAATACAGTGTCTCTAAGCATGAGGCGGAGGCTACCACACCAATCGAATTGATCAGTCGTGGCCCAGATGGGCGCTTTGTTATGGATCCAACTGATATGGAAACCCCAGTAAAGGCACGGCGCATTGAGGGCTTCCCCTTCGTGGAGGAGTCTGACCTGTATCCTGAATTTCGACAGTCAGATGAGGAGAATGATGATCCGGGGCCAATGCCACCTGTGATGGCTACCCTCAGACCCCATCAGATTTCCCCCATTTCATCTAGCCAAGAATCTTACTTGCAGCCCCCAGCCTACAGTCCCCGCTTCCAGAGGCCCATGGAAGGCATGACTATAATGGAGACCAGTCGGCTCCAGGCAACAGGGCAGATCCGTGGTGCTCCTCACTTCCGAGCCTTTACCCATGGCCAGTTCTACAGCTATTTGGGAAGTCCAGGAGAACCTGAGCCTCCTCCTCCCTTCTACATGCCAGACACCAGCCCTCTCAGCTCTGTAATGTCCTCTCCTCCATACCACCTAGAGGGGCCTTTTGGTCATCCCACCATACCAGAGGAAATTGGTGAGGTCTCTGGCTACACCCTTCCCTTGGCACACCCCTCCACCTCGCGCTCTCCAGACATCTGGCAGAGACCAGATTTCACCTTTGCTACAATAGAGGGTCCTCACTTTATTTTCCCACCACCACACCCTTTGCATCTTCATCCGGAACCTCCCCTTCCTCCCCCTCTTGTTCTTCCTCCTAGTGCCCTCCAGCCCTCCACACTTCAAGTTTCTCCTTACCCTGGTATCCTGCAGCTGGAGGCCCCAAAGAGCCGCCCAGGCAAGTCTCCCAGCAAGGTCAAGCCTCAGGGCCTTCCAGCCAAGCGTTTACCTATGCAAGAGGCACAGAGTCTAGGGCAGCTAAGACACACAAGCCACGGTATGGGTGTACCGGTATTGCCTTACCCTGACCCGGTGTCTCACATGGTTGGCCCAAGCTCGTTCGGAAGCCTGGACACAAGATGGTACGAGCTTACACCCAGGCTTAGCCCCAGGCAGCCCCGTAGGATGGAACCCAGCATGGTTGTTCTCCAGCCATCCCGCCTCTCACCTCTAACTCAGAGCCCTATTAGCTCTCACGAAGGCTCACCAGAGATTGTAGTTCGTCCCAGACCCCGTCCTAGTATGATCCAACCCCCGATTCCTCCTGAGATGTCTGAGATCACCCTTCAACCTCCTTCTTCAGCTAGCTTCTCTAGGAGGTCCTCCCCTTCCTCTTCTCCTGCTCAAGGCCAAGGCAGCCGAAGGGCAAGTCCCAGCTACCGATCCCACATGGCATTTGCCACCTCAGCGGCAAGCTATCCGTCACAGTCCCCTTCACCTCCTGTAGAAAGCAGCAACATTTTTGGGCAGATGCCAACCCAGAGGAGGACTGAGGAGGAGATCCTTCCATCAGAACCCTCTCCACCCCAGTTATCAGCTTCAGGGTAG
>TCONS_00038604
CCGCGTCTGGCTGCCGTGCGCTGGTGCAGGTGCTCTATTTCATCGAGAGAGGATGCGAAAGGAAAGAAGGGGAGGGAAAGAATGAAGGGAACCGTCGGAGAAAAGTATGCAGGGCATGAGTAAAAGGGTCTCAGCAGCTGACAGCGCGTCTAACGACCAGGGGCTCGGCTAAGAATGATTTATTGAAAGGGGCACTTTGAGATATGATGAGGTTTCTCTCTGGTTGGCAATAGTACTATGATTTGGTATGTGGCCACTTTGATAGCAAGTGTATTCAGCACCAGAGGAACAGCTGCTCAAGGTGCCCACGGAGTCAGAGAGGAGCCCCAGTTTGTGACGTCCCGCGCTGGGGAGACTGTGATTCTGGGATGTGACGTAGTTCACCCACTCAACGGCCAGCCCTACGTGGTGGAGTGGTTCAAGTTTGGAGTTCCCATCCCCTTCTTCATCAACTTCCGCTTCTACCCTCCCCATGTGGACCCCGAGTACGCCGGCCGAGCCAGCCTGCATGGCAAGTCATCTCTACGTATTGAGAGGGTTCGATCAGAAGACCAGGGCTGGTACGAGTGCAAGGTCCTGATGCTGGAACAACAGTACCACACCTTCCACAACGGCAGCTGGGTGCACCTCACTGTCAATGCTCCTCCGACGTTCACGGATACGCCGCCGCAGTATGTAGAGGCCAAAGAGGGTGGCAGCATCACTCTAAGCTGCACAGCGTTCGGCAATCCCAAACCTTCAGTCAGCTGGCTGAGAGAGGGCAACCCCGTACAGGACAGCACCAAGTACAAGGTGAGTGATGGCAGTCTGACACTGGTTTCCATCAGCCGTGAGGATAGGGGTGCGTACACATGCCGGGCATACAGCGAACAAGGAGAGGCAGTTCACACCACACGCCTGCTCGTCCAAGGACCCCCATTTATTGTCTCACCGCCAGAGAACATAACCGTAAACATTTCCCAGGATGCATTCTTCACTTGTCAGGCCGAGGCTTACCCTGGCAACCTAACATACACCTGGTTCTGGGAGGAAGATAACGTCTTCTTCAAGAATGATCTGAAGCGCAGAGTGAGTATTCTGATCGATGGTTCACTCATCATCTCCCAGGTGAAACCAGAGGATGCTGGGAAATACACCTGCAGTCCGAGTAACAGCCTCGGCCGCCCACCTTCAGCATCAGCGTACCTGACAGTGCATTACCCTGCCCGTGTGATAAACATGCCGCCCGTTATTTACGTGGCCATTGGACTGCCGGGGTACATCCGCTGCCCGGTGGATGCCAACCCGCCTGTCACTTCAGTGAAGTGGAAAAAAGACGGCCTGCCTCTGCGGATAGAGAAGTACCCTGGTTGGAGCCAAATGGAAGATGGGAGCATTCGAGTGTCTGAGGTGACAGAGGACTCTCTCGGCACCTACACCTGCGTGCCTTACAATAGCCTCGGTACCATGGGACCGTCCCCTCCCGCCCCCCTGGTGCTAAAGGATCCACCCAAATTTTTGGTGGTTCCTGGAGGGGAGTACAGGCAGGAGGCTGGTCGAGAGCTGGTCATCCCCTGCGAGGCAGAAGGAGACCCATTCCCCAACATTACATGGAGAAAGGTAGGGAAGCCCAGCAGAAGCAAGCACAACGTCCTACCGAGAGGCAGCTTACAGTTCAAATCTCTCAGCAAGGAGGACCACGGGGAGTGGGAGTGTGTCGCCTCCAATGTCGCCACGAGCATCACTGCCAGCACGCACCTCCTAGTAATCGGCACAAGCCCACACGCCCCCGCCAAAGTCCACGTTACGGTCTCGACGACCTCGGCCAATGTCTCGTGGGATTCCAGTTACGATGGCGGCTTTGAGCAGACATTCTCAGTCTGGTACGGCCATGTGGTGAAGAGGGAGCAGTTGGGACCGCATGACTGGCTGTCCATGCCTGTGCCCAGCGGACAGCACTGGCTCCTGGTGCAAGGTCTGGAGCCCGAGACGGCCTACCAATTCAGCGTCCTGGCCCAGAACAAGCTGGGAACGGGCCCGTTCAGCGAGGTCGTCACTGTGAACACACTAGTATTTCCTATAAGTACCCCAGAACCACTGGTGCTGCTTACCCCACCACGGTGCCTCACAGCCAACCGGACACAGCAGGGAGTCCTGCTCACATGGATCCCTCCAGCCAATCACACGTCGCCAATCGATCACTACATCATGGATTTCCGCCTTGGGGAGAGATGGGATGTTCTTGATGATGCAATTCCTGCTGGAGAGACTGAGATCTTGGCAAGAGACCTGATTCAGGAGGCCTGGTATGAGTTCAGAGTGATGGCGGTTATGGAGGACCTTGTCAGTGAGCCCAGTAATGTAGTGGGAGTCTCTAGCACAGACTACTTCCCACCGCCTGAGGTGCCAGACGAGGGCCTGGCGCGGCCGGTGGTGGCAGGCATTGTGGCCACCATCTGTTTCCTGGCAGCCGCCATCCTCTTCAGCACGCTAGCAGCCTGTTTCGTCAACAAACAGAGACGGCGTAAGCTCAAGAGGAGACGAGatcCCCCTCTGTCTATAACACACTGCAGAAAGAGTGTGGAGACTCCGTCATCATCTGGAAAGATTAGTCCAGAAAGCATTCGCTCAATAGGACCCCCTTCAGAGTCTTCAGAGGATGGTTTACGAGCTAAGAAGTTTCCTCAAAGTCCTGCCAAGGAGGAGCTTTCCTTATACAAGAAGACCAAGAGAGCAATAATTAGCAAGAAATACAGTGTCTCTAAGCATGAGGCGGAGGCTACCACACCAATCGAATTGATCAGTCGTGGCCCAGATGGGCGCTTTGTTATGGATCCAACTGATATGGAAACCCCAGTAAAGGCACGGCGCATTGAGGGCTTCCCCTTCGTGGAGGAGTCTGACCTGTATCCTGAATTTCGACAGTCAGATGAGGAGAATGATGATCCGGGGCCAATGCCACCTGTGATGGCTACCCTCAGACCCCATCAGATTTCCCCCATTTCATCTAGCCAAGAATCTTACTTGCAGCCCCCAGCCTACAGTCCCCGCTTCCAGAGGCCCATGGAAGGCATGACTATAATGGAGACCAGTCGGCTCCAGGCAACAGGGCAGATCCGTGGTGCTCCTCACTTCCGAGCCTTTACCCATGGCCAGTTCTACAGCTATTTGGGAAGTCCAGGAGAACCTGAGCCTCCTCCTCCCTTCTACATGCCAGACACCAGCCCTCTCAGCTCTGTAATGTCCTCTCCTCCATACCACCTAGAGGGGCCTTTTGGTCATCCCACCATACCAGAGGAAATTGGTGAGGGTGAGATTCAGCATTATGCAGTCTCTGGCTACACCCTTCCCTTGGCACACCCCTCCACCTCGCGCTCTCCAGACATCTGGCAGAGACCAGATTTCACCTTTGCTACAATAGAGGGTCCTCACTTTATTTTCCCACCACCACACCCTTTGCATCTTCATCCGGAACCTCCCCTTCCTCCCCCTCTTGTTCTTCCTCCTAGTGCCCTCCAGCCCTCCACACTTCAAGTTTCTCCTTACCCTGGTATCCTGCAGCTGGAGGCCCCAAAGAGCCGCCCAGGCAAGTCTCCCAGCAAGGTCAAGCCTCAGGGCCTTCCAGCCAAGCGTTTACCTATGCAAGAGGCACAGAGTCTAGGGCAGCTAAGACACACAAGCCACGGTATGGGTGTACCGGTATTGCCTTACCCTGACCCGGTGTCTCACATGGTTGGCCCAAGCTCGTTCGGAAGCCTGGACACAAGATGGTACGAGCTTACACCCAGGCTTAGCCCCAGGCAGCCCCGTAGGATGGAACCCAGCATGGTTGTTCTCCAGCCATCCCGCCTCTCACCTCTAACTCAGAGCCCTATTAGCTCTCACGAAGGCTCACCAGAGATTGTAGTTCGTCCCAGACCCCGTCCTAGTATGATCCAACCCCCGATTCCTCCTGAGATGTCTGAGATCACCCTTCAACCTCCTTCTTCAGCTAGCTTCTCTAGGAGGTCCTCCCCTTCCTCTTCTCCTGCTCAAGGCCAAGGCAGCCGAAGGGCAAGTCCCAGCTACCGATCCCACATGGCATTTGCCACCTCAGCGGCAAGCTATCCGTCACAGTCCCCTTCACCTCCTGTAGAAAGCAGCAACATTTTTGGGCAGATGCCAACCCAGAGGAGGACTGAGGAGGAGATCCTTCCATCAGAACCCTCTCCACCCCAGTTATCAGCTTCAGGGTAG

Function

symbol description
igsf9bb Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Orthologous to human IGSF9B (immunoglobulin superfamily member 9B).

GO:

id name namespace
GO:0043005 neuron projection cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-091112-15 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in neuron projection. Orthologous to human IGSF9B (immunoglobulin superfamily member 9B).

Ensembl:

ensembl_id ENSDARG00000069467

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00038603 False 3945 mRNA 0.55 19 24703188 24865217
TCONS_00038604 True 4215 mRNA 0.55 18 24703188 24865454

Neighbor

gene id symbol gene type direction distance location
XLOC_019603 NA coding downstream 16973 24679050 ~ 24686215 (-)
XLOC_019602 arhgap32b coding downstream 70410 24539896 ~ 24632778 (-)
XLOC_019601 sc5d coding downstream 167678 24531679 ~ 24535510 (-)
XLOC_019600 CR936479.1 coding downstream 792985 23845537 ~ 23910203 (-)
XLOC_019599 ncam1a coding downstream 956241 23338059 ~ 23746947 (-)
XLOC_019605 rfc2 coding upstream 340835 25206289 ~ 25213616 (-)
XLOC_019606 NA coding upstream 350936 25216390 ~ 25226888 (-)
XLOC_019607 nfrkb coding upstream 381479 25246933 ~ 25272416 (-)
XLOC_019608 st14b coding upstream 410239 25275693 ~ 25295087 (-)
XLOC_019609 BX510938.1 coding upstream 511298 25376752 ~ 25378011 (-)
XLOC_019597 NA non-coding downstream 1548666 23146291 ~ 23154522 (-)
XLOC_019596 NA non-coding downstream 1570870 23115344 ~ 23132318 (-)
XLOC_019566 NA non-coding downstream 2304175 22385127 ~ 22399013 (-)
XLOC_019633 NA non-coding upstream 1385922 26251376 ~ 26395308 (-)
XLOC_019640 NA non-coding upstream 1735507 26600961 ~ 26603641 (-)
XLOC_019643 BX465841.1 non-coding upstream 1836367 26701821 ~ 26701954 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000006_04786488_04866122 IGSF9BB, IGSF9B coding CI01000006 null 4786425 ~ 4866504 (+)
bowfin (Amia calva) AMCG00004395 NA coding CM030121.1 CM030121.1 46688600 ~ 46702427 (+)