XLOC_019670


Basic Information

Item Value
gene id XLOC_019670
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007132.7
NCBI id CM002905.2
chromosome length 45934066
location 28729172 ~ 28731671 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00039661
CTCTTTGCAAAGGGAACATAAGTTAAAACgtaaataaagatatatatatatatatataatatgcaGGCAttctttgttaaaataatttttaaacaaacattggTCAGACATTTATCTCCAGCTGGGAAAGCAATGTGCTACTGAAGACAGAAGAGGTCATCACACACCTTCATCATTAGAATCATCCCATGTATGTATTTGAAGAGAAATTAAAGATACATAATCATTGCCCCTAACCCAAAGGCCTTCACACCCTCATTGATTCATGTGACCATTCCAGTAACCCTTACCCTCCCACGTCACGAAGAACAGAGATGAAACTGAGCCAGGGTGCGTTCATGACATAAACGTTCACAGAAAGTGCTGACAGGATAGATAAACTGCTATGTGTTTACTTCACCTGGGTGAAGCTTGTTCAATAAAATTGGTTTCTTTTCCAGATACatacctttttttttaagtgcagatAAAGTCTTTAAAGAAATAAAGACCTTTTAAAGAAATAAACGTGGAATTCAGCCACATGCTTTTCaaatattaatcatatatttaatTGATATACATATATTGCCAACATTGGCACGTTCAATATTGCACACAGTAATGAAATATAGCACTGGGAAGAGAGGGGGGAAAATAAACTTTGAGagccaaaaatgacaaatttagcAACACTAAAAAGTTgggaaaagaaaagcaaaaaaatccTGGCCACACCCCTCAACTAGGCGTTTGGTCTGTGATAATGGCATATTACTGCCAAACTACACAGAGAGGCTTCAGTACGGAAGTTTACTTCACAACAAAAGAGTTTGTTGAGAGCCACTATACACCTTTTTGCCTGGCACATAACATTTGATAAATTAAGAAAGGctcattttgttttcataaagGTGGCTTAAAAAGCATTTGTGAGTCACTCGTTGTGATCAGAACCTTCAAATAATGAATTCCTTTTCATCCAAACAGACCACGAGTTACGCAGTAGCATAAAGGAGGGCCAGAGCCAAACAAAATCAAGAAGTAATAAAGAAAGCGggcaagaaaaaacaaaaaacgacaAAAACCCAAACTTGGATCTAAAGCACCAGCCAGTGTATAAGCATGCGGAGTCTGTAAGGCACCAGGTTGTTTAATGCTGAAGAGTATGCTCCCCAACAAGTTTCATTAAAGTCAGGGTCTCCCAACACAGGTCCTCAAGGGCCCCCATGAAAAAGGGCTTTCATTCCAATAGGCTTGTCATTGATGTCTTATCAAACAGTCAAAAGAGTTGATATATTATCTTATTATGTACACATACTTCTTGAACAAGTCATTCCTTAAAAGAAAAACGAGTACTGGTTCAATTACCTGACCAAACATCACTGACATTATGGACATTACAAAGAAGAGTCCTTGAGGACGAACATTGAGAAATCCACCTCAATGTGGCTGTGTACAGGTTAACATGCAACTACAGCATTCCTTGGCGCCACTCATCCTCTCATTGGTAGactgatatatatatttatatatatttttttttttttccatatatttctatatatttttaaaccctTTAACAGATTGTTTGTCAAATCCCCCACTAAAAACGTGGGTTGTTTTCTTCTCCACTGAAATACATCTGATTCACAAAATCATACTTTGTATGTTTTTCTACATGAGCATTTTCATATGATTCTTTGTATCGAGGGGTCCGGTTACAAAAAATGTTTTCCGAGAGCTCTTTCTCTTTCTGTTGTCACTGCTCTTACTTATTAAGTACCTTTTTTACACACTGTGCATGACAACGAGACACAAATACATAGCATATCATCTGCATGACAAgaagttcaattaaaaaaatacactggTAATACTCCTCAGAATGTTTGTGAAGAGGTCGCCCACCGCCTCCAGACACCTGCTCACAGCGGGCCCTCAGCTGACCTCTGTACCTCTATCAATCAACAGGTTGATATTTTTCTTTTCTAGCTAGCCCTCAGGTGATGCTTGGAATATCTAGTGGCAAGGCTACCATGACAACCTCTTCAGATGATTCGAaaatttggttaaaaaaactaaaacatctgATTTGTGCTGAAGTCATTAGCTCACACATAAAGGAACCGCTTCCTCGGCAAGAACTCCATTGCAAACACTTTTATAATATCTTGGAACGTGTAAAAAAGTTCTCGGTTAATAAGGGAAAGAAACACTCAGTTCTGTTGTCGTCAAGTAGGAAACACAGTTCATATATAATGTTATTACTTGGTTTAGCAGCCGCTTACTGTATTAATGGTGGGTAAGTGGATGTCATCCAGCGATGGGTGGACTGTCAGTCTGTGGAggtttgtatttttctttttttttttgtgggtagTGCTCCCTTGGAGTTAAACAGTTACTTATCTTTTTATGTATCTCTCTTTTTTACAGCACA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00039661 True 2422 lncRNA 0.37 2 28729172 28731671

Neighbor

gene id symbol gene type direction distance location
XLOC_019668 NA coding downstream 175259 28549749 ~ 28553913 (-)
XLOC_019667 epdl2 coding downstream 205624 28513057 ~ 28523548 (-)
XLOC_019666 NA coding downstream 224477 28493077 ~ 28504695 (-)
XLOC_019665 rasgrp2 coding downstream 289576 28415888 ~ 28439596 (-)
XLOC_019664 NA coding downstream 317257 28402970 ~ 28411915 (-)
XLOC_019671 BX511240.1 coding upstream 52156 28783827 ~ 28783944 (-)
XLOC_019672 cxxc5a coding upstream 131450 28863121 ~ 28920245 (-)
XLOC_019673 CR759846.1 coding upstream 214344 28946015 ~ 28952986 (-)
XLOC_019674 timd4 coding upstream 358981 29090652 ~ 29100110 (-)
XLOC_019675 havcr1 coding upstream 369301 29100972 ~ 29110607 (-)
XLOC_019663 NA non-coding downstream 365358 28363474 ~ 28363814 (-)
XLOC_019662 BX927322.1 non-coding downstream 665850 28063206 ~ 28063322 (-)
XLOC_019678 NA non-coding upstream 562750 29294421 ~ 29295713 (-)
XLOC_019685 CR762480.2 non-coding upstream 1001765 29733436 ~ 29979758 (-)
XLOC_019686 NA non-coding upstream 1021549 29753220 ~ 29754550 (-)

Expression


Co-expression Network