LOC110500387 (cherp)


Basic Information

Item Value
gene id LOC110500387
gene name cherp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 19052575 ~ 19064650 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577848.2
GCTTTATTCCAGTGGCGCCCTGAATTATGAAGTCATCGAAGTACTTCCGGTGCCGGAATGTCTATAACATTTTGGAAATGCTTTGTATTTTCCTTAAACCACATAGCTAgataacatttttacaaattaatctgtgtgtctttgtggttcAGTGGACTCGCTGTTAATTTATTGAAGACAAACATGGATATTCCTACAGCTCCTGAGGACCAAGAGCTGAAAAATGTAATTGACAAACTGGCCCAGTTTGTGGCTCGAAATGGCCCTGAGTTTGAGAAGATGACAATGGAGAAACAGAAGGACAATTCCAAATTCTCTTTTCTGTTTGGAGGGGACTTCTTCGCCTATTACCGGTGCAAGCTTGCAATGGAACAACACCAGCATCCTACTACCCACGAATGTGAGGAGTATAAGTTGGAAGATCTTTATAATCCACCTGGTACGGAAGTCCTAGACGTCCCTCCACCAATCGCCATCCTGGCCCCGCCCCCCATCGCCCCTGCCACGCCATCTCTAGATGAACTCATCCAGCAGAGCCAATGGAACCTGCAGCAGCAAGAACAGCAGCTGCTCACTCTCAGACAGGAGCAAGTGACTGCAGCCATAGCTCTGGCCATGGAGCAGCAGACCCAGAAGCTGCTGGCGGAGACTCAGCAGGACATATCTGAATTTGACAACCTGCTGCAGCCCATCATTGACACCTGCACTAAAGACGCCATCTCGGCTGGTAAGAACTGGATGTTCAACAACGCCAAGGGCCCACTGCACTGTGAGCTGATGTGCTCACACCTCCGGAACCGCATCACAGCCGACACAGCTCACTTTGAACTCCGCCTACACCTCATCTATCTCACCAATGATGTCCTCCATCACTGTCAGAGGAAGCAGCAGAGGGACCTGCTAGCAGCGCTACAGAAGGTGGTGGTGCCCATCTACTGCACCAGCTTCTTGGCTGTAGAGGAGGACAAGCAGCAGAAGATCACACGTCTTCTACAACTCTGGGAAAAGAATGGCTACTTCGACGAGGTGACGATCCAGCAGTTACAGAGTCCAGCTGTGGGCCTGGGCCAGTATCAGgcctCTCTGATCACAGAGTACGCTGCCGTGGTGCAGCCCATTCAGCTGGCCTTCCAGCAACAGATCCAGACCCTGAAGACGCAGCATGAGGAGTTTGTGGCCAACCTGGCGGTTCAGCAGCAGACTGCAGCAGCAGTGAGCCAGCTAGCTGCAGCAGAGCCTGACATTAAGGCAGTCACCACTCAGCCTgGAGAGGTGAAGTCGTCCATGTCTGGCCCTCCTGGTGATTATGACGGCGCCCAGTCCAGATCGGACCCCGGTGCCAACAGTGGCCACTCTGATAACGCCTCCTCTAAACCCTGGTTCGACCCACAACACATGTCTGGAGGCTGGAACCCCAATCAGCCACCTCCGTTCGACCCCACCCAGGCTCCCCCACCGTGCCCCCCCTGGAACAGCCACGAGGGCATCTGGAATGAGCAGAGGGGGGACCCCAGCTGGAGCGGAGGCCCtccaaggggggaggggggtcccTGGAGCGGAGGGGGAGGACAGAATGAGCCCCCTCCCAACTGGAGCGGTCAGTACGACCAGCCCCCCTGGAGCAACCAGGGACCTGACCAGCCCCCCTGGGGCCAGAGAGAGCACCCCTTCCCCCGCATGCAGAGGCCCCCCCACTTCAGAGGGCCCTTCACGCCCCACCAGCCAGGTCCCCCTCCCTTTAACCAGCCGCCCCCGCCTCCCCACAACTTTGGCCGGTTCCCGCCGCGCTACATGCAGGATGACTTTCCACCCAGGCACCATTTTGAAAGGCCGCCCTACCCTCCACACCACTTTGACTACCCACAGGGAGACTTCCCTGGAGACATGGGCCCTCCGCACCACCACCCTAGCCAGAGGATCCCTCCTCTGGGTATGGGGGGGGAGGAGCACCCTCCCTGGGGGGGTAACCAGCACCCAGACTTCGGCCCCCCATCCCACGGCTTCAACGGCCAGTCCCCCCACATGAGACAGCGTCCGGCCCCGGCTCACGTTAACCAGGATGACCCCAGCCTGGTCCCCAACGTACCCTACTTTGACCTGCCCGCCGGACTCATGGCCCCTCTAGTCAAACTGGAAGACCATGACTACAAAGCACTGGATCCTAAAGACATCCGTCTGCCTCCCCCAATGCCCCCCAGTGAACGCCTGCTAGCTGCTGTGGAGGCCTTCTACAGCCCCCCCTCCCATGACGGACCCAGGAACAGTGAGGGCTGGGAACAGAACGGCCTATATGAGTTCTTCAGAGCTAAGATGAGAGCCAGGAGGCGAAAGGGCCAGGAGAAACACAACAGtgcACACGGTAGTCGTTCACACAGCCGTTCTCATAGTCAGGGTCGCTCCTCGTCTGAATCCAGCTCAAGATCCTCCAAGTCCTCCCGCTCCTCCTCCCGGTCCCGATCTCGCTCCTACTCCCGATCTCGCTCCAGGAGCATGAGCCGATCCAGGTCGTCCCGCAGTCGCTCTCGTTCTAGGTCTCGCTCCAGATCTCGCTCTCCTGACAAGAGACGGCAAGAGAGGCCTGCCCCCGCCTCTGCCCCTGCCTCCCAGAAGTCCCGTAGCCCCTCTCCTCCAGCTACGTCTGGTCTGGGCGCAGCCCCCTCGGTCCTGCCTCCAGACAGCAGGCTGGGAGAGGAGAACAAGGGCCATCAGCTGCTCATGAAAATGGGCTGGAGTGGTTCTGGGGGGCTTGGAGCAAAGGAGCAGGGCATCCAGGACCCCATCAAGGGGGGAGAGCTCCGGGACAAGTGGGACCAGTATAAAGGAGTGGGGGTGTCTCTGGATGACCCTTATGAGAACTACCGCAGGAACAAGAGCTACAACTTTGTAGCTCGCATGAAAGCAAGGGAGGAAGTGAATCGGGAACCACAAGAGCCCCCTCCTACTGAATAATGTGCATCGTAAAGCAAACAAACCTAACCCAGAACATACCTCTTCAGTCAGTTTTTTGTACAGAATAATGTTCTTATAGTATGTTTTGAATGTTGCTTTTTTGTGATACTCATTCATGTGTTTTCTTATGTTCCAGTGTTTGATGACTTGGAAATGGATATAAACTATTGTTGCTCTTTTGTAAGAAAAATAAAATACGTTTGTGGAATTCACCCACTGATGTAATGTCAAATGTGAATCAAATTTACCCTCTAACCACACGCTGtaaagattttttaaatgtttgaatttGTTTGAATAAATGCACTGTTTGTCTCCGCTTGA
>XM_021577992.2
GCTTTATTCCAGTGGCGCCCTGAATTATGAAGTCATCGAAGTACTTCCGGTGCCGGAATGTCTATAACATTTTGGAAATGCTTTGTATTTTCCTTAAACCACATAGCTAgataacatttttacaaattaatctgtgtgtctttgtggttcAGTGGACTCGCTGTTAATTTATTGAAGACAAACATGGATATTCCTACAGCTCCTGAGGACCAAGAGCTGAAAAATGTAATTGACAAACTGGCCCAGTTTGTGGCTCGAAATGGCCCTGAGTTTGAGAAGATGACAATGGAGAAACAGAAGGACAATTCCAAATTCTCTTTTCTGTTTGGAGGGGACTTCTTCGCCTATTACCGGTGCAAGCTTGCAATGGAACAACACCAGCATCCTACTACCCACGAATGTGAGGAGTATAAGTTGGAAGATCTTTATAATCCACCTGGTACGGAAGTCCTAGACGTCCCTCCACCAATCGCCATCCTGGCCCCGCCCCCCATCGCCCCTGCCACGCCATCTCTAGATGAACTCATCCAGCAGAGCCAATGGAACCTGCAGCAGCAAGAACAGCAGCTGCTCACTCTCAGACAGGAGCAAGTGACTGCAGCCATAGCTCTGGCCATGGAGCAGCAGACCCAGAAGCTGCTGGCGGAGACTCAGCAGGACATATCTGAATTTGACAACCTGCTGCAGCCCATCATTGACACCTGCACTAAAGACGCCATCTCGGCTGGTAAGAACTGGATGTTCAACAACGCCAAGGGCCCACTGCACTGTGAGCTGATGTGCTCACACCTCCGGAACCGCATCACAGCCGACACAGCTCACTTTGAACTCCGCCTACACCTCATCTATCTCACCAATGATGTCCTCCATCACTGTCAGAGGAAGCAGCAGAGGGACCTGCTAGCAGCGCTACAGAAGGTGGTGGTGCCCATCTACTGCACCAGCTTCTTGGCTGTAGAGGAGGACAAGCAGCAGAAGATCACACGTCTTCTACAACTCTGGGAAAAGAATGGCTACTTCGACGAGGTGACGATCCAGCAGTTACAGAGTCCAGCTGTGGGCCTGGGCCAGTATCAGgcctCTCTGATCACAGAGTACGCTGCCGTGGTGCAGCCCATTCAGCTGGCCTTCCAGCAACAGATCCAGACCCTGAAGACGCAGCATGAGGAGTTTGTGGCCAACCTGGCGGTTCAGCAGCAGACTGCAGCAGCAGTGAGCCAGCTAGCTGCAGCAGAGCCTGACATTAAGGCAGTCACCACTCAGCCTgGAGAGGTGAAGTCGTCCATGTCTGGCCCTCCTGGTGATTATGACGGCGCCCAGTCCAGATCGGACCCCGGTGCCAACAGTGGCCACTCTGATAACGCCTCCTCTAAACCCTGGTTCGACCCACAACACATGTCTGGAGGCTGGAACCCCAATCAGCCACCTCCGTTCGACCCCACCCAGGCTCCCCCACCGTGCCCCCCCTGGAACAGCCACGAGGGCATCTGGAATGAGCAGAGGGGGGACCCCAGCTGGAGCGGAGGCCCtccaaggggggaggggggtcccTGGAGCGGAGGGGGAGGACAGAATGAGCCCCCTCCCAACTGGAGCGGTCAGTACGACCAGCCCCCCTGGAGCAACCAGGGACCTGACCAGCCCCCCTGGGGCCAGAGAGAGCACCCCTTCCCCCGCATGCAGAGGCCCCCCCACTTCAGAGGGCCCTTCACGCCCCACCAGCCAGGTCCCCCTCCCTTTAACCAGCCGCCCCCGCCTCCCCACAACTTTGGCCGGTTCCCGCCGCGCTACATGCAGGATGACTTTCCACCCAGGCACCATTTTGAAAGGCCGCCCTACCCTCCACACCACTTTGACTACCCACAGGGAGACTTCCCTGGAGACCAAGACATGGGCCCTCCGCACCACCACCCTAGCCAGAGGATCCCTCCTCTGGGTATGGGGGGGGAGGAGCACCCTCCCTGGGGGGGTAACCAGCACCCAGACTTCGGCCCCCCATCCCACGGCTTCAACGGCCAGTCCCCCCACATGAGACAGCGTCCGGCCCCGGCTCACGTTAACCAGGATGACCCCAGCCTGGTCCCCAACGTACCCTACTTTGACCTGCCCGCCGGACTCATGGCCCCTCTAGTCAAACTGGAAGACCATGACTACAAAGCACTGGATCCTAAAGACATCCGTCTGCCTCCCCCAATGCCCCCCAGTGAACGCCTGCTAGCTGCTGTGGAGGCCTTCTACAGCCCCCCCTCCCATGACGGACCCAGGAACAGtgcACACGGTAGTCGTTCACACAGCCGTTCTCATAGTCAGGGTCGCTCCTCGTCTGAATCCAGCTCAAGATCCTCCAAGTCCTCCCGCTCCTCCTCCCGGTCCCGATCTCGCTCCTACTCCCGATCTCGCTCCAGGAGCATGAGCCGATCCAGGTCGTCCCGCAGTCGCTCTCGTTCTAGGTCTCGCTCCAGATCTCGCTCTCCTGACAAGAGACGGCAAGAGAGGCCTGCCCCCGCCTCTGCCCCTGCCTCCCAGAAGTCCCGTAGCCCCTCTCCTCCAGCTACGTCTGGTCTGGGCGCAGCCCCCTCGGTCCTGCCTCCAGACAGCAGGCTGGGAGAGGAGAACAAGGGCCATCAGCTGCTCATGAAAATGGGCTGGAGTGGTTCTGGGGGGCTTGGAGCAAAGGAGCAGGGCATCCAGGACCCCATCAAGGGGGGAGAGCTCCGGGACAAGTGGGACCAGTATAAAGGAGTGGGGGTGTCTCTGGATGACCCTTATGAGAACTACCGCAGGAACAAGAGCTACAACTTTGTAGCTCGCATGAAAGCAAGGGAGGAAGTGAATCGGGAACCACAAGAGCCCCCTCCTACTGAATAATGTGCATCGTAAAGCAAACAAACCTAACCCAGAACATACCTCTTCAGTCAGTTTTTTGTACAGAATAATGTTCTTATAGTATGTTTTGAATGTTGCTTTTTTGTGATACTCATTCATGTGTTTTCTTATGTTCCAGTGTTTGATGACTTGGAAATGGATATAAACTATTGTTGCTCTTTTGTAAGAAAAATAAAATACGTTTGTGGAATTCACCCACTGATGTAATGTCAAATGTGAATCAAATTTACCCTCTAACCACACGCTGtaaagattttttaaatgtttgaatttGTTTGAATAAATGCACTGTTTGTCTCCGCTTGA
>XM_021577770.2
CTTTATTCCAGTGGCGCCCTGAATTATGAAGTCATCGAAGTACTTCCGGTGCCGGAATGTCTATAACATTTTGGAAATGCTTTGTATTTTCCTTAAACCACATAGCTAgataacatttttacaaattaatctgtgtgtctttgtggttcAGTGGACTCGCTGTTAATTTATTGAAGACAAACATGGATATTCCTACAGCTCCTGAGGACCAAGAGCTGAAAAATGTAATTGACAAACTGGCCCAGTTTGTGGCTCGAAATGGCCCTGAGTTTGAGAAGATGACAATGGAGAAACAGAAGGACAATTCCAAATTCTCTTTTCTGTTTGGAGGGGACTTCTTCGCCTATTACCGGTGCAAGCTTGCAATGGAACAACACCAGCATCCTACTACCCACGAATGTGAGGAGTATAAGTTGGAAGATCTTTATAATCCACCTGGTACGGAAGTCCTAGACGTCCCTCCACCAATCGCCATCCTGGCCCCGCCCCCCATCGCCCCTGCCACGCCATCTCTAGATGAACTCATCCAGCAGAGCCAATGGAACCTGCAGCAGCAAGAACAGCAGCTGCTCACTCTCAGACAGGAGCAAGTGACTGCAGCCATAGCTCTGGCCATGGAGCAGCAGACCCAGAAGCTGCTGGCGGAGACTCAGCAGGACATATCTGAATTTGACAACCTGCTGCAGCCCATCATTGACACCTGCACTAAAGACGCCATCTCGGCTGGTAAGAACTGGATGTTCAACAACGCCAAGGGCCCACTGCACTGTGAGCTGATGTGCTCACACCTCCGGAACCGCATCACAGCCGACACAGCTCACTTTGAACTCCGCCTACACCTCATCTATCTCACCAATGATGTCCTCCATCACTGTCAGAGGAAGCAGCAGAGGGACCTGCTAGCAGCGCTACAGAAGGTGGTGGTGCCCATCTACTGCACCAGCTTCTTGGCTGTAGAGGAGGACAAGCAGCAGAAGATCACACGTCTTCTACAACTCTGGGAAAAGAATGGCTACTTCGACGAGGTGACGATCCAGCAGTTACAGAGTCCAGCTGTGGGCCTGGGCCAGTATCAGgcctCTCTGATCACAGAGTACGCTGCCGTGGTGCAGCCCATTCAGCTGGCCTTCCAGCAACAGATCCAGACCCTGAAGACGCAGCATGAGGAGTTTGTGGCCAACCTGGCGGTTCAGCAGCAGACTGCAGCAGCAGTGAGCCAGCTAGCTGCAGCAGAGCCTGACATTAAGGCAGTCACCACTCAGCCTgGAGAGGTGAAGTCGTCCATGTCTGGCCCTCCTGGTGATTATGACGGCGCCCAGTCCAGATCGGACCCCGGTGCCAACAGTGGCCACTCTGATAACGCCTCCTCTAAACCCTGGTTCGACCCACAACACATGTCTGGAGGCTGGAACCCCAATCAGCCACCTCCGTTCGACCCCACCCAGGCTCCCCCACCGTGCCCCCCCTGGAACAGCCACGAGGGCATCTGGAATGAGCAGAGGGGGGACCCCAGCTGGAGCGGAGGCCCtccaaggggggaggggggtcccTGGAGCGGAGGGGGAGGACAGAATGAGCCCCCTCCCAACTGGAGCGGTCAGTACGACCAGCCCCCCTGGAGCAACCAGGGACCTGACCAGCCCCCCTGGGGCCAGAGAGAGCACCCCTTCCCCCGCATGCAGAGGCCCCCCCACTTCAGAGGGCCCTTCACGCCCCACCAGCCAGGTCCCCCTCCCTTTAACCAGCCGCCCCCGCCTCCCCACAACTTTGGCCGGTTCCCGCCGCGCTACATGCAGGATGACTTTCCACCCAGGCACCATTTTGAAAGGCCGCCCTACCCTCCACACCACTTTGACTACCCACAGGGAGACTTCCCTGGAGACCAAGACATGGGCCCTCCGCACCACCACCCTAGCCAGAGGATCCCTCCTCTGGGTATGGGGGGGGAGGAGCACCCTCCCTGGGGGGGTAACCAGCACCCAGACTTCGGCCCCCCATCCCACGGCTTCAACGGCCAGTCCCCCCACATGAGACAGCGTCCGGCCCCGGCTCACGTTAACCAGGATGACCCCAGCCTGGTCCCCAACGTACCCTACTTTGACCTGCCCGCCGGACTCATGGCCCCTCTAGTCAAACTGGAAGACCATGACTACAAAGCACTGGATCCTAAAGACATCCGTCTGCCTCCCCCAATGCCCCCCAGTGAACGCCTGCTAGCTGCTGTGGAGGCCTTCTACAGCCCCCCCTCCCATGACGGACCCAGGAACAGTGAGGGCTGGGAACAGAACGGCCTATATGAGTTCTTCAGAGCTAAGATGAGAGCCAGGAGGCGAAAGGGCCAGGAGAAACACAACAGtgcACACGGTAGTCGTTCACACAGCCGTTCTCATAGTCAGGGTCGCTCCTCGTCTGAATCCAGCTCAAGATCCTCCAAGTCCTCCCGCTCCTCCTCCCGGTCCCGATCTCGCTCCTACTCCCGATCTCGCTCCAGGAGCATGAGCCGATCCAGGTCGTCCCGCAGTCGCTCTCGTTCTAGGTCTCGCTCCAGATCTCGCTCTCCTGACAAGAGACGGCAAGAGAGGCCTGCCCCCGCCTCTGCCCCTGCCTCCCAGAAGTCCCGTAGCCCCTCTCCTCCAGCTACGTCTGGTCTGGGCGCAGCCCCCTCGGTCCTGCCTCCAGACAGCAGGCTGGGAGAGGAGAACAAGGGCCATCAGCTGCTCATGAAAATGGGCTGGAGTGGTTCTGGGGGGCTTGGAGCAAAGGAGCAGGGCATCCAGGACCCCATCAAGGGGGGAGAGCTCCGGGACAAGTGGGACCAGTATAAAGGAGTGGGGGTGTCTCTGGATGACCCTTATGAGAACTACCGCAGGAACAAGAGCTACAACTTTGTAGCTCGCATGAAAGCAAGGGAGGAAGTGAATCGGGAACCACAAGAGCCCCCTCCTACTGAATAATGTGCATCGTAAAGCAAACAAACCTAACCCAGAACATACCTCTTCAGTCAGTTTTTTGTACAGAATAATGTTCTTATAGTATGTTTTGAATGTTGCTTTTTTGTGATACTCATTCATGTGTTTTCTTATGTTCCAGTGTTTGATGACTTGGAAATGGATATAAACTATTGTTGCTCTTTTGTAAGAAAAATAAAATACGTTTGTGGAATTCACCCACTGATGTAATGTCAAATGTGAATCAAATTTACCCTCTAACCACACGCTGtaaagattttttaaatgtttgaatttGTTTGAATAAATGCACTGTTTGTCTCCGCTTGA
>XM_021577923.2
CTTTATTCCAGTGGCGCCCTGAATTATGAAGTCATCGAAGTACTTCCGGTGCCGGAATGTCTATAACATTTTGGAAATGCTTTGTATTTTCCTTAAACCACATAGCTAgataacatttttacaaattaatctgtgtgtctttgtggttcAGTGGACTCGCTGTTAATTTATTGAAGACAAACATGGATATTCCTACAGCTCCTGAGGACCAAGAGCTGAAAAATGTAATTGACAAACTGGCCCAGTTTGTGGCTCGAAATGGCCCTGAGTTTGAGAAGATGACAATGGAGAAACAGAAGGACAATTCCAAATTCTCTTTTCTGTTTGGAGGGGACTTCTTCGCCTATTACCGGTGCAAGCTTGCAATGGAACAACACCAGCATCTTTATAATCCACCTGGTACGGAAGTCCTAGACGTCCCTCCACCAATCGCCATCCTGGCCCCGCCCCCCATCGCCCCTGCCACGCCATCTCTAGATGAACTCATCCAGCAGAGCCAATGGAACCTGCAGCAGCAAGAACAGCAGCTGCTCACTCTCAGACAGGAGCAAGTGACTGCAGCCATAGCTCTGGCCATGGAGCAGCAGACCCAGAAGCTGCTGGCGGAGACTCAGCAGGACATATCTGAATTTGACAACCTGCTGCAGCCCATCATTGACACCTGCACTAAAGACGCCATCTCGGCTGGTAAGAACTGGATGTTCAACAACGCCAAGGGCCCACTGCACTGTGAGCTGATGTGCTCACACCTCCGGAACCGCATCACAGCCGACACAGCTCACTTTGAACTCCGCCTACACCTCATCTATCTCACCAATGATGTCCTCCATCACTGTCAGAGGAAGCAGCAGAGGGACCTGCTAGCAGCGCTACAGAAGGTGGTGGTGCCCATCTACTGCACCAGCTTCTTGGCTGTAGAGGAGGACAAGCAGCAGAAGATCACACGTCTTCTACAACTCTGGGAAAAGAATGGCTACTTCGACGAGGTGACGATCCAGCAGTTACAGAGTCCAGCTGTGGGCCTGGGCCAGTATCAGgcctCTCTGATCACAGAGTACGCTGCCGTGGTGCAGCCCATTCAGCTGGCCTTCCAGCAACAGATCCAGACCCTGAAGACGCAGCATGAGGAGTTTGTGGCCAACCTGGCGGTTCAGCAGCAGACTGCAGCAGCAGTGAGCCAGCTAGCTGCAGCAGAGCCTGACATTAAGGCAGTCACCACTCAGCCTgGAGAGGTGAAGTCGTCCATGTCTGGCCCTCCTGGTGATTATGACGGCGCCCAGTCCAGATCGGACCCCGGTGCCAACAGTGGCCACTCTGATAACGCCTCCTCTAAACCCTGGTTCGACCCACAACACATGTCTGGAGGCTGGAACCCCAATCAGCCACCTCCGTTCGACCCCACCCAGGCTCCCCCACCGTGCCCCCCCTGGAACAGCCACGAGGGCATCTGGAATGAGCAGAGGGGGGACCCCAGCTGGAGCGGAGGCCCtccaaggggggaggggggtcccTGGAGCGGAGGGGGAGGACAGAATGAGCCCCCTCCCAACTGGAGCGGTCAGTACGACCAGCCCCCCTGGAGCAACCAGGGACCTGACCAGCCCCCCTGGGGCCAGAGAGAGCACCCCTTCCCCCGCATGCAGAGGCCCCCCCACTTCAGAGGGCCCTTCACGCCCCACCAGCCAGGTCCCCCTCCCTTTAACCAGCCGCCCCCGCCTCCCCACAACTTTGGCCGGTTCCCGCCGCGCTACATGCAGGATGACTTTCCACCCAGGCACCATTTTGAAAGGCCGCCCTACCCTCCACACCACTTTGACTACCCACAGGGAGACTTCCCTGGAGACCAAGACATGGGCCCTCCGCACCACCACCCTAGCCAGAGGATCCCTCCTCTGGGTATGGGGGGGGAGGAGCACCCTCCCTGGGGGGGTAACCAGCACCCAGACTTCGGCCCCCCATCCCACGGCTTCAACGGCCAGTCCCCCCACATGAGACAGCGTCCGGCCCCGGCTCACGTTAACCAGGATGACCCCAGCCTGGTCCCCAACGTACCCTACTTTGACCTGCCCGCCGGACTCATGGCCCCTCTAGTCAAACTGGAAGACCATGACTACAAAGCACTGGATCCTAAAGACATCCGTCTGCCTCCCCCAATGCCCCCCAGTGAACGCCTGCTAGCTGCTGTGGAGGCCTTCTACAGCCCCCCCTCCCATGACGGACCCAGGAACAGTGAGGGCTGGGAACAGAACGGCCTATATGAGTTCTTCAGAGCTAAGATGAGAGCCAGGAGGCGAAAGGGCCAGGAGAAACACAACAGtgcACACGGTAGTCGTTCACACAGCCGTTCTCATAGTCAGGGTCGCTCCTCGTCTGAATCCAGCTCAAGATCCTCCAAGTCCTCCCGCTCCTCCTCCCGGTCCCGATCTCGCTCCTACTCCCGATCTCGCTCCAGGAGCATGAGCCGATCCAGGTCGTCCCGCAGTCGCTCTCGTTCTAGGTCTCGCTCCAGATCTCGCTCTCCTGACAAGAGACGGCAAGAGAGGCCTGCCCCCGCCTCTGCCCCTGCCTCCCAGAAGTCCCGTAGCCCCTCTCCTCCAGCTACGTCTGGTCTGGGCGCAGCCCCCTCGGTCCTGCCTCCAGACAGCAGGCTGGGAGAGGAGAACAAGGGCCATCAGCTGCTCATGAAAATGGGCTGGAGTGGTTCTGGGGGGCTTGGAGCAAAGGAGCAGGGCATCCAGGACCCCATCAAGGGGGGAGAGCTCCGGGACAAGTGGGACCAGTATAAAGGAGTGGGGGTGTCTCTGGATGACCCTTATGAGAACTACCGCAGGAACAAGAGCTACAACTTTGTAGCTCGCATGAAAGCAAGGGAGGAAGTGAATCGGGAACCACAAGAGCCCCCTCCTACTGAATAATGTGCATCGTAAAGCAAACAAACCTAACCCAGAACATACCTCTTCAGTCAGTTTTTTGTACAGAATAATGTTCTTATAGTATGTTTTGAATGTTGCTTTTTTGTGATACTCATTCATGTGTTTTCTTATGTTCCAGTGTTTGATGACTTGGAAATGGATATAAACTATTGTTGCTCTTTTGTAAGAAAAATAAAATACGTTTGTGGAATTCACCCACTGATGTAATGTCAAATGTGAATCAAATTTACCCTCTAACCACACGCTGtaaagattttttaaatgtttgaatttGTTTGAATAAATGCACTGTTTGTCTCCGCTTGA

Function

symbol description
cherp Predicted to enable RNA binding activity. Predicted to be involved in cellular calcium ion homeostasis. Predicted to act upstream of or within RNA processing. Predicted to be active in perinuclear region of cytoplasm. Orthologous to human CHERP (calcium homeostasis endoplasmic reticulum protein).

NR:

description
calcium homeostasis endoplasmic reticulum protein-like isoform X3

GO: NA

KEGG:

id description
K12841 CHERP; calcium homeostasis endoplasmic reticulum protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577848.2 False 3273 mRNA 0.55 18 19052575 19064650
XM_021577992.2 False 3192 mRNA 0.55 17 19052575 19064650
XM_021577770.2 False 3278 mRNA 0.55 18 19052576 19064650
XM_021577923.2 True 3239 mRNA 0.55 17 19052576 19064650

Neighbor

gene id symbol gene type direction distance location
LOC110500307 LOC106573820 coding upstream 10608 19024216 ~ 19041967 (+)
LOC110500236 LOC106573821 coding upstream 80389 18957927 ~ 18972186 (+)
LOC110500115 LOC106573822 coding upstream 98530 18922258 ~ 18954045 (+)
LOC110499562 LOC106573826 coding upstream 173658 18859952 ~ 18878917 (+)
tnfaip8l1 LOC106573828 coding upstream 199621 18841198 ~ 18852954 (+)
calr3a crt coding downstream 4342 19068992 ~ 19076771 (+)
rad23ab LOC106573817 coding downstream 12174 19076824 ~ 19084655 (+)
eps15l1a eps15l1 coding downstream 26575 19091225 ~ 19121925 (+)
mrpl54 LOC106573541 coding downstream 284522 19349172 ~ 19351119 (+)
LOC110532010 LOC106613687 coding downstream 287440 19352090 ~ 19357017 (+)
G17601 NA non-coding upstream 4295 19048022 ~ 19048280 (+)
G17564 NA non-coding upstream 6702 19043419 ~ 19045873 (+)
G17576 NA non-coding upstream 43445 19008891 ~ 19009130 (+)
G17567 NA non-coding upstream 53272 18999100 ~ 18999303 (+)
G17566 NA non-coding upstream 57969 18994217 ~ 18994606 (+)
G17605 NA non-coding downstream 15629 19080279 ~ 19080491 (+)
G17606 NA non-coding downstream 16235 19080885 ~ 19081096 (+)
G17607 NA non-coding downstream 23252 19087902 ~ 19088231 (+)
G17615 NA non-coding downstream 47817 19112467 ~ 19112947 (+)
G17420 NA other upstream 96367 18882723 ~ 18956208 (+)
ccdc124 cc124 other upstream 1061399 17975918 ~ 17991176 (+)
LOC110495874 LOC106573877 other upstream 1387567 17654164 ~ 17673094 (+)
LOC110492876 LOC106613263 other upstream 2084785 16962997 ~ 16967790 (+)
LOC110492606 LOC106573909 other upstream 2132166 16916482 ~ 16920945 (+)
G18481 NA other downstream 500199 19564849 ~ 19565221 (+)
LOC110502506 LOC106573550 other downstream 504135 19568684 ~ 19575028 (+)
LOC110503939 LOC106573564 other downstream 799141 19863734 ~ 19865619 (+)
G19083 NA other downstream 850936 19915586 ~ 19915832 (+)
G19359 NA other downstream 1177995 20242645 ~ 20242875 (+)

Expression


Co-expression Network