G17607


Basic Information

Item Value
gene id G17607
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 19087902 ~ 19088231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU20617
gtaaagggtttaaacaccgtttcccatgcttgttcaatgaaccataaacaattaatgaacatgcacctgtggaaaagtcattaagacactaacagcttacagatggtaggcaattaaggtcacagttatgaaaacttaggacattaaagatgcctttctactgactctgaaaaacaccaaaagaaaggtgaccagggtccctgctcatctgcatgaatgtgccttaggcatgctgcaaggaggcatgaggactgcagatgtggccagggaaataaattgcaatgtcaccggcatcaccggcaacaacgtcgcctatgggcacaaacccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20617 True 330 lncRNA 0.58 1 19087902 19088231

Neighbor

gene id symbol gene type direction distance location
rad23ab LOC106573817 coding upstream 3247 19076824 ~ 19084655 (+)
calr3a crt coding upstream 11131 19068992 ~ 19076771 (+)
LOC110500387 cherp coding upstream 23252 19052575 ~ 19064650 (+)
LOC110500307 LOC106573820 coding upstream 45935 19024216 ~ 19041967 (+)
LOC110500236 LOC106573821 coding upstream 115716 18957927 ~ 18972186 (+)
eps15l1a eps15l1 coding downstream 2994 19091225 ~ 19121925 (+)
mrpl54 LOC106573541 coding downstream 260941 19349172 ~ 19351119 (+)
LOC110532010 LOC106613687 coding downstream 263859 19352090 ~ 19357017 (+)
LOC110501592 LOC106573542 coding downstream 271180 19359411 ~ 19368957 (+)
si:ch1073-396h14.1 LOC106573543 coding downstream 296753 19384984 ~ 19442316 (+)
G17606 NA non-coding upstream 6806 19080885 ~ 19081096 (+)
G17605 NA non-coding upstream 7411 19080279 ~ 19080491 (+)
G17601 NA non-coding upstream 39622 19048022 ~ 19048280 (+)
G17564 NA non-coding upstream 42029 19043419 ~ 19045873 (+)
G17576 NA non-coding upstream 78772 19008891 ~ 19009130 (+)
G17615 NA non-coding downstream 24236 19112467 ~ 19112947 (+)
G17616 NA non-coding downstream 34021 19122252 ~ 19122585 (+)
G17640 NA non-coding downstream 67433 19155664 ~ 19156178 (+)
G17642 NA non-coding downstream 69681 19157912 ~ 19158166 (+)
G17420 NA other upstream 131694 18882723 ~ 18956208 (+)
ccdc124 cc124 other upstream 1096726 17975918 ~ 17991176 (+)
LOC110495874 LOC106573877 other upstream 1422894 17654164 ~ 17673094 (+)
LOC110492876 LOC106613263 other upstream 2120112 16962997 ~ 16967790 (+)
LOC110492606 LOC106573909 other upstream 2167493 16916482 ~ 16920945 (+)
G18481 NA other downstream 476618 19564849 ~ 19565221 (+)
LOC110502506 LOC106573550 other downstream 480554 19568684 ~ 19575028 (+)
LOC110503939 LOC106573564 other downstream 775560 19863734 ~ 19865619 (+)
G19083 NA other downstream 827355 19915586 ~ 19915832 (+)
G19359 NA other downstream 1154414 20242645 ~ 20242875 (+)

Expression


Co-expression Network