LOC110532269 (LOC106573375)


Basic Information

Item Value
gene id LOC110532269
gene name LOC106573375
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 36074950 ~ 36080429 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989478.1
CTGAGGTGGGTCTTTGGCATCCTCATGCACCCTCTCTCGCCTTCTCTTCTCTCAGAATTCTTATAGCTCAGGATAGCGATGAGGTTGGCTGTGCTCTGCGTGTGCGGGACCCTGCTGGCCTTCTCTACGCCCCCTGGGAACTATGCAAACCTCAGCAAGGGAGACTTTAATTGGGGTACAGATTCTGGGAGCTGCTTGGTAACTATAAAGCCTGCAGGGAAGTGTGGGGGAGAGGGGATGGACGAGGACGCATGCCCCTACCGAGTGACCTTGCCTCCGCTGGACGTCATGCTGCCCCGGCAGCTCAGGGAATTGGAGAGGACGGTGAAGGAGGTGCAGAGGCTAAAGGAGACCGTGGAGCAACTGAAGAGAGCCTGCATGGAGTGCAGGATAAGCCAgatggagcgggagagagagaggctgggggacagagagagggagaaagaagagaaggagaaggtgagatGCTGTCCTAAAGCCCAGTCCACCCAGCCCAACCAGCTCAACAAGCTCAAACCCAATGACCTATCCAAGAACTGGCTCAACTTCAACCAGCCTTAG

Function

NR:

description
zinc finger CCCH domain-containing protein 13-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989478.1 True 561 mRNA 0.56 2 36074950 36080429

Neighbor

gene id symbol gene type direction distance location
LOC110522040 LOC106573374 coding downstream 4092 36066946 ~ 36070858 (-)
fam185a fam185a coding downstream 27367 36037537 ~ 36047583 (-)
LOC110522092 lrrc17 coding downstream 42771 36005053 ~ 36045196 (-)
armc10 armc10 coding downstream 92063 35971331 ~ 35982887 (-)
cax2 LOC106573379 coding downstream 113537 35939742 ~ 35961413 (-)
tmem60 LOC106573373 coding upstream 38842 36119271 ~ 36120989 (-)
LOC110522098 LOC106573370 coding upstream 41241 36121670 ~ 36131381 (-)
LOC110522050 LOC106573365 coding upstream 60622 36141051 ~ 36189706 (-)
LOC110522124 fbxl14 coding upstream 151058 36231487 ~ 36234308 (-)
LOC110522087 NA coding upstream 180759 36261188 ~ 36264106 (-)
G38119 NA non-coding downstream 131683 35942686 ~ 35943267 (-)
G38147 NA non-coding downstream 132346 35942360 ~ 35942604 (-)
LOC110522154 LOC105022174 non-coding downstream 175298 35892507 ~ 35914512 (-)
G38139 LOC106573381 non-coding downstream 183291 35888587 ~ 35891659 (-)
G38224 NA non-coding upstream 26175 36106604 ~ 36107897 (-)
G38229 NA non-coding upstream 27969 36108398 ~ 36108872 (-)
G38269 NA non-coding upstream 110734 36191163 ~ 36191567 (-)
G38223 NA non-coding upstream 146273 36226702 ~ 36231191 (-)
G38314 NA non-coding upstream 199919 36280348 ~ 36281267 (-)
G38045 LOC106573386 other downstream 352894 35721440 ~ 35722056 (-)
G37976 NA other downstream 491342 35583292 ~ 35583608 (-)
G37907 NA other downstream 633622 35440918 ~ 35441328 (-)
G37310 LOC106573403 other downstream 796945 35273709 ~ 35278005 (-)
G36196 NA other downstream 1693718 34341562 ~ 34381232 (-)
LOC110522187 LOC106573361 other upstream 289665 36370091 ~ 36409064 (-)
G38855 NA other upstream 428109 36508538 ~ 36510829 (-)
G40079 NA other upstream 1636111 37716540 ~ 37717033 (-)
G40732 NA other upstream 2044851 38125280 ~ 38125725 (-)
G40768 LOC106573348 other upstream 2107059 38187488 ~ 38191736 (-)

Expression


Co-expression Network