LOC118965226 (cdc26)


Basic Information

Item Value
gene id LOC118965226
gene name cdc26
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 62440764 ~ 62441131 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036982214.1
GTGGCTAGCTACTATccaaaataaacaacaacaaaatctaaCGTTAGTGGTAGAAGATGCTGCGCAGAAAGCCCATCCGTCTGGAGCTGAAGTTGGATGACACGGAGGAGTTTGAGAGTGTCAAGAAAGAGCTTGAGAGTCGGAAGAAACAGCGAGATGAGGTGGATGTTGTTGGCGTGGCGATGTCGAGTGACATGGTGGGAGCCGGTAGTGGAACAGGGGATGGGAAGACACGGGAACAGATGATCAATGAGAGAATAGGCTACAAGCCCCATCCTAAACCCAACACCTTGCCATCACTCTTGGGAAACCTGCAATGTTGGGTTCCTAATGGACACATTACAGACAGCTAAAATGGTTGGCACCTC

Function

symbol description
cdc26 Acts upstream of or within mitotic cell cycle and regulation of mitotic cell cycle. Predicted to be located in nucleus. Predicted to be part of anaphase-promoting complex. Is expressed in digestive system; head; and heart. Orthologous to human CDC26 (cell division cycle 26).

NR:

description
PREDICTED: anaphase-promoting complex subunit CDC26 isoform X1

GO:

id name namespace
GO:0031145 anaphase-promoting complex-dependent catabolic process biological_process
GO:0070979 protein K11-linked ubiquitination biological_process
GO:0030071 regulation of mitotic metaphase/anaphase transition biological_process
GO:0005680 anaphase-promoting complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036982214.1 True 368 mRNA 0.49 1 62440764 62441131

Neighbor

gene id symbol gene type direction distance location
LOC110526511 LOC100194723 coding upstream 50756 62383690 ~ 62390008 (+)
LOC110526492 LOC106576813 coding upstream 74565 62360989 ~ 62366199 (+)
LOC110526440 LOC106576815 coding upstream 272077 62153349 ~ 62168687 (+)
fam204a LOC106576816 coding upstream 343259 62064250 ~ 62097505 (+)
sec23ip LOC106576824 coding upstream 695607 61733628 ~ 61745157 (+)
LOC110526548 LOC106576808 coding downstream 64040 62505171 ~ 62526302 (+)
LOC110526555 LOC106576807 coding downstream 144733 62585864 ~ 62608428 (+)
LOC110526580 LOC106576805 coding downstream 180829 62621960 ~ 62630539 (+)
polr1b polr1b coding downstream 190423 62631554 ~ 62651962 (+)
cyp1b1 cyp1b1 coding downstream 294640 62735771 ~ 62739992 (+)
G68384 NA non-coding upstream 24640 62414680 ~ 62416124 (+)
G68132 LOC106576819 non-coding upstream 457843 61981733 ~ 61982921 (+)
G68130 NA non-coding upstream 462701 61977849 ~ 61978063 (+)
G68127 NA non-coding upstream 464667 61975881 ~ 61976097 (+)
G68119 NA non-coding upstream 475586 61964814 ~ 61965178 (+)
G68469 NA non-coding downstream 91038 62532169 ~ 62532538 (+)
G68472 NA non-coding downstream 94477 62535608 ~ 62535941 (+)
G68479 NA non-coding downstream 98984 62540115 ~ 62540433 (+)
G68498 NA non-coding downstream 127222 62568353 ~ 62568619 (+)
G68477 NA non-coding downstream 168618 62609749 ~ 62610025 (+)
G67930 mcmbp other upstream 707376 61729765 ~ 61733388 (+)
G67806 LOC106581772 other upstream 1125512 61314874 ~ 61315252 (+)
G66188 NA other upstream 2498700 59941486 ~ 59942064 (+)
G65442 NA other upstream 3115635 59324636 ~ 59325129 (+)
G64338 NA other upstream 3740385 58699296 ~ 58700379 (+)
G70011 NA other downstream 833832 63274963 ~ 63275296 (+)
LOC110526969 stk32c other downstream 2368458 64809255 ~ 64946164 (+)
LOC110527164 LOC106576754 other downstream 3474604 65915581 ~ 65922285 (+)
G73515 NA other downstream 3846548 66287679 ~ 66288469 (+)
LOC118965274 LOC106576739 other downstream 3979364 66417495 ~ 66424081 (+)

Expression


Co-expression Network