G13435


Basic Information

Item Value
gene id G13435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14813430 ~ 14813754 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU15898
atctcatatgcatatgtatatactgtactctatatcatcgactgcatccttatgtaatacatgtatcactagccactttaactatgccactttgtttacactcatctcatatatatatactgtactcgataccatctactgtatcttgcctatgctgctctgtaccatcactcattcatgtatccttatgtacatattctttatccccttacactgtgtataagacagtagttttggaattgttagttagattacttgttggttattactgcattgtcggaaatagaagcacaagcatttcgctacactcgcattaacatctgct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15898 True 325 lncRNA 0.45 1 14813430 14813754

Neighbor

gene id symbol gene type direction distance location
LOC110486505 LOC106574055 coding upstream 317582 14350545 ~ 14495848 (+)
gpr52 LOC106574057 coding upstream 407273 14400579 ~ 14406157 (+)
LOC110486340 fam163a coding upstream 463803 14318536 ~ 14349627 (+)
tdrd5 LOC106574052 coding upstream 509324 14251389 ~ 14304106 (+)
axdnd1 axdnd1 coding upstream 569018 14220167 ~ 14244412 (+)
LOC110487584 LOC106574067 coding downstream 180183 14993937 ~ 15003427 (+)
LOC110487655 LOC106574076 coding downstream 202384 15016138 ~ 15019092 (+)
elav1 elav1 coding downstream 210665 15024419 ~ 15026535 (+)
LOC110487930 LOC106574072 coding downstream 261430 15075184 ~ 15080304 (+)
LOC110529430 LOC106574078 coding downstream 304096 15117850 ~ 15126002 (+)
G13432 NA non-coding upstream 5606 14807357 ~ 14807824 (+)
G13429 NA non-coding upstream 15353 14797810 ~ 14798077 (+)
G13428 NA non-coding upstream 16587 14796557 ~ 14796843 (+)
G13426 NA non-coding upstream 18556 14794498 ~ 14794874 (+)
G13425 NA non-coding upstream 19236 14793961 ~ 14794194 (+)
G13443 NA non-coding downstream 5664 14819418 ~ 14819629 (+)
G13444 NA non-coding downstream 6902 14820656 ~ 14820872 (+)
G13448 NA non-coding downstream 10161 14823915 ~ 14824318 (+)
G13450 NA non-coding downstream 11108 14824862 ~ 14825090 (+)
G13456 NA non-coding downstream 21303 14835057 ~ 14835316 (+)
G13434 NA other upstream 806 14811771 ~ 14812624 (+)
G13391 NA other upstream 112700 14700176 ~ 14700730 (+)
G13381 NA other upstream 133403 14679698 ~ 14680027 (+)
G13380 NA other upstream 133852 14679350 ~ 14679578 (+)
LOC110486057 NA other upstream 605416 14192456 ~ 14214939 (+)
G13639 NA other downstream 147800 14961554 ~ 14962003 (+)
sass6 sass6 other downstream 646150 15447458 ~ 15468011 (+)
LOC110490510 LOC106573976 other downstream 881287 15694810 ~ 15716774 (+)
LOC118941201 NA other downstream 1765332 16578956 ~ 16592967 (+)
LOC110492606 LOC106573909 other downstream 2102745 16916482 ~ 16920945 (+)

Expression


Co-expression Network