G13443


Basic Information

Item Value
gene id G13443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14819418 ~ 14819629 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU15908
ACTATAGACACCGAACTATCCATACCTCCTTTGGTTCAACCTTGGAACTCTGACCTGTTTAATATATGACTGAAAGACTCATAAATTGGGGGTTTTGTTGAAGTTTTTCTGACAAATGCTTTGACACATATTTCAAAATAACCTTATCTTTGACGATGCAATCATGGAACACATGGCACAACACTATCCAATATCTTCAGCAAAGAGCTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15908 True 212 lncRNA 0.37 1 14819418 14819629

Neighbor

gene id symbol gene type direction distance location
LOC110486505 LOC106574055 coding upstream 323570 14350545 ~ 14495848 (+)
gpr52 LOC106574057 coding upstream 413261 14400579 ~ 14406157 (+)
LOC110486340 fam163a coding upstream 469791 14318536 ~ 14349627 (+)
tdrd5 LOC106574052 coding upstream 515312 14251389 ~ 14304106 (+)
axdnd1 axdnd1 coding upstream 575006 14220167 ~ 14244412 (+)
LOC110487584 LOC106574067 coding downstream 174308 14993937 ~ 15003427 (+)
LOC110487655 LOC106574076 coding downstream 196509 15016138 ~ 15019092 (+)
elav1 elav1 coding downstream 204790 15024419 ~ 15026535 (+)
LOC110487930 LOC106574072 coding downstream 255555 15075184 ~ 15080304 (+)
LOC110529430 LOC106574078 coding downstream 298221 15117850 ~ 15126002 (+)
G13435 NA non-coding upstream 5664 14813430 ~ 14813754 (+)
G13432 NA non-coding upstream 11594 14807357 ~ 14807824 (+)
G13429 NA non-coding upstream 21341 14797810 ~ 14798077 (+)
G13428 NA non-coding upstream 22575 14796557 ~ 14796843 (+)
G13426 NA non-coding upstream 24544 14794498 ~ 14794874 (+)
G13444 NA non-coding downstream 1027 14820656 ~ 14820872 (+)
G13448 NA non-coding downstream 4286 14823915 ~ 14824318 (+)
G13450 NA non-coding downstream 5233 14824862 ~ 14825090 (+)
G13456 NA non-coding downstream 15428 14835057 ~ 14835316 (+)
G13465 NA non-coding downstream 31656 14851285 ~ 14851561 (+)
G13434 NA other upstream 6794 14811771 ~ 14812624 (+)
G13391 NA other upstream 118688 14700176 ~ 14700730 (+)
G13381 NA other upstream 139391 14679698 ~ 14680027 (+)
G13380 NA other upstream 139840 14679350 ~ 14679578 (+)
LOC110486057 NA other upstream 611404 14192456 ~ 14214939 (+)
G13639 NA other downstream 141925 14961554 ~ 14962003 (+)
sass6 sass6 other downstream 640275 15447458 ~ 15468011 (+)
LOC110490510 LOC106573976 other downstream 875412 15694810 ~ 15716774 (+)
LOC118941201 NA other downstream 1759457 16578956 ~ 16592967 (+)
LOC110492606 LOC106573909 other downstream 2096870 16916482 ~ 16920945 (+)

Expression


Co-expression Network