G13448


Basic Information

Item Value
gene id G13448
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 14823915 ~ 14824318 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU15913
TTACACTAAGCCTATACTTCCCTTGCACTAAGCCTATACTTCCCTTGCACTAAGCCTATACTTCCCTTACACTAAGCCTATACTTCCCTTACACTAAGCCTATACTTCCCTTGCACTAAGCCTATACTTCCCTTGCACTAAGCCTATACTTCCCTTACACTAAGCCTATACTTCCCTTGCACTAAGCCTATACTTCCCTTACACTAAGCCTATACTTCCCTTACACTAAGCCTATACTTCCCTTACACTAAGCCTATACTTCCCTTACACTAAGCCTATACTTCCCTTGCACTAAGCCCATACTTCCCTTACACTAAGCCTATACTTCCCTTGCACTAAGCCTATACTTCCCTTGCACTAAGCCTATACTTCCCTTGCACTAAGCCTATACTTCCCTTGCACTA

Function

NR:

description
PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15913 True 404 lncRNA 0.39 1 14823915 14824318

Neighbor

gene id symbol gene type direction distance location
LOC110486505 LOC106574055 coding upstream 328067 14350545 ~ 14495848 (+)
gpr52 LOC106574057 coding upstream 417758 14400579 ~ 14406157 (+)
LOC110486340 fam163a coding upstream 474288 14318536 ~ 14349627 (+)
tdrd5 LOC106574052 coding upstream 519809 14251389 ~ 14304106 (+)
axdnd1 axdnd1 coding upstream 579503 14220167 ~ 14244412 (+)
LOC110487584 LOC106574067 coding downstream 169619 14993937 ~ 15003427 (+)
LOC110487655 LOC106574076 coding downstream 191820 15016138 ~ 15019092 (+)
elav1 elav1 coding downstream 200101 15024419 ~ 15026535 (+)
LOC110487930 LOC106574072 coding downstream 250866 15075184 ~ 15080304 (+)
LOC110529430 LOC106574078 coding downstream 293532 15117850 ~ 15126002 (+)
G13444 NA non-coding upstream 3043 14820656 ~ 14820872 (+)
G13443 NA non-coding upstream 4286 14819418 ~ 14819629 (+)
G13435 NA non-coding upstream 10161 14813430 ~ 14813754 (+)
G13432 NA non-coding upstream 16091 14807357 ~ 14807824 (+)
G13429 NA non-coding upstream 25838 14797810 ~ 14798077 (+)
G13450 NA non-coding downstream 544 14824862 ~ 14825090 (+)
G13456 NA non-coding downstream 10739 14835057 ~ 14835316 (+)
G13465 NA non-coding downstream 26967 14851285 ~ 14851561 (+)
G13467 NA non-coding downstream 32241 14856559 ~ 14856820 (+)
G13468 NA non-coding downstream 32977 14857295 ~ 14857919 (+)
G13434 NA other upstream 11291 14811771 ~ 14812624 (+)
G13391 NA other upstream 123185 14700176 ~ 14700730 (+)
G13381 NA other upstream 143888 14679698 ~ 14680027 (+)
G13380 NA other upstream 144337 14679350 ~ 14679578 (+)
LOC110486057 NA other upstream 615901 14192456 ~ 14214939 (+)
G13639 NA other downstream 137236 14961554 ~ 14962003 (+)
sass6 sass6 other downstream 635586 15447458 ~ 15468011 (+)
LOC110490510 LOC106573976 other downstream 870723 15694810 ~ 15716774 (+)
LOC118941201 NA other downstream 1754768 16578956 ~ 16592967 (+)
LOC110492606 LOC106573909 other downstream 2092181 16916482 ~ 16920945 (+)

Expression


Co-expression Network