G17027


Basic Information

Item Value
gene id G17027
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 18156632 ~ 18157034 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU19978
gttatattgtcgtcaagactttatataggaagggagaggagggcgtgtttgaaaagttttataacccatgtcccttcacaggggcgggccactgattgagcagagccctaaccttatgaaaacccaaatctctcatttggaagctaaaattacatttcatctcttcaccaataattttatattcaaacatttaaattgaacaacaattccatgtgaatccgataactacaatgtgcagactttccactgtagagtttatgtcatcttatcattgatgagaatgtctcagatgacaaccgaactgacatcatattcattaagtaccaccgcatatgttcaattggtcggattaccagaatatagttaatttccccccaccttctgatgttcccagaatctctat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19978 True 403 lncRNA 0.41 1 18156632 18157034

Neighbor

gene id symbol gene type direction distance location
LOC110497621 LOC106573864 coding upstream 47806 18106822 ~ 18108826 (+)
LOC118943582 NA coding upstream 60225 18075977 ~ 18096407 (+)
kcnn1b kcnn1 coding upstream 154201 17993047 ~ 18002431 (+)
ccdc124 cc124 coding upstream 168203 17975918 ~ 17991176 (+)
slc5a5 slc5a5 coding upstream 213133 17914509 ~ 17943499 (+)
LOC110497920 LOC106573861 coding downstream 226334 18383368 ~ 18391532 (+)
LOC110498361 LOC106573862 coding downstream 305973 18463007 ~ 18471679 (+)
LOC110498532 LOC106573857 coding downstream 322065 18479099 ~ 18494177 (+)
LOC110531985 LOC106573857 coding downstream 371512 18528546 ~ 18558059 (+)
LOC110499030 LOC106573833 coding downstream 521506 18678540 ~ 18690222 (+)
G17025 NA non-coding upstream 860 18155573 ~ 18155772 (+)
G17023 NA non-coding upstream 1715 18154709 ~ 18154917 (+)
G17022 NA non-coding upstream 2601 18153753 ~ 18154031 (+)
G17019 NA non-coding upstream 6972 18148201 ~ 18149660 (+)
G17016 NA non-coding upstream 9436 18144684 ~ 18147196 (+)
G17033 NA non-coding downstream 5711 18162745 ~ 18162946 (+)
G17053 NA non-coding downstream 15573 18172607 ~ 18172890 (+)
G17054 NA non-coding downstream 15945 18172979 ~ 18173290 (+)
G17062 NA non-coding downstream 20344 18177378 ~ 18177785 (+)
G17143 NA non-coding downstream 124351 18281385 ~ 18282115 (+)
LOC110495874 LOC106573877 other upstream 491624 17654164 ~ 17673094 (+)
LOC110492876 LOC106613263 other upstream 1188842 16962997 ~ 16967790 (+)
LOC110492606 LOC106573909 other upstream 1236223 16916482 ~ 16920945 (+)
LOC118941201 NA other upstream 1575750 16578956 ~ 16592967 (+)
G17420 NA other downstream 725689 18882723 ~ 18956208 (+)
G18481 NA other downstream 1407815 19564849 ~ 19565221 (+)
LOC110502506 LOC106573550 other downstream 1411751 19568684 ~ 19575028 (+)
LOC110503939 LOC106573564 other downstream 1706757 19863734 ~ 19865619 (+)
G19083 NA other downstream 1758552 19915586 ~ 19915832 (+)

Expression


Co-expression Network