G17143


Basic Information

Item Value
gene id G17143
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 18281385 ~ 18282115 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU20097
gtgtcgtctgcgtagagatggatcagggaatcgcccgcagcaagagcaacatcattgatatatacagagaaaagagtcggtccgagaattgaaccctgtggcacccccatagagactgccagaggaccggacaacatgccctccgatttgacacactgaactatgtctgcaaagtaattggtgaaccaggcaaggcagtcattagaaaaacgaaggctactgagtctgccgataagaatatggtgattgacagagtcgaaagccttggccaggtcgatgaagacggctgcacagtactgtcttttatcgatggcggttatgatatcgtttagtaccttgagcgtggctgaggtgcacccgtgaccggctcggaaaccagattgcacatcggagaaggtacggtgggattcgggatggatataggtctgtaacaatttgggtccagggtgtctccccctttgaagagggggatgactgcggcagctttccaatccttggggatctcagacgacatgaaagagaggttgaacaggctggtaataggggttgcgacaatgacggcggatagtttcagaaatagagggtccagattgtcaagaccagctaatttgtacgggtccagattttgcagctctttcagaacatctgctatctggatttgggtaaaggagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20097 True 673 lncRNA 0.56 2 18281385 18282115

Neighbor

gene id symbol gene type direction distance location
LOC110497621 LOC106573864 coding upstream 172559 18106822 ~ 18108826 (+)
LOC118943582 NA coding upstream 184978 18075977 ~ 18096407 (+)
kcnn1b kcnn1 coding upstream 278954 17993047 ~ 18002431 (+)
ccdc124 cc124 coding upstream 292956 17975918 ~ 17991176 (+)
slc5a5 slc5a5 coding upstream 337886 17914509 ~ 17943499 (+)
LOC110497920 LOC106573861 coding downstream 101253 18383368 ~ 18391532 (+)
LOC110498361 LOC106573862 coding downstream 180892 18463007 ~ 18471679 (+)
LOC110498532 LOC106573857 coding downstream 196984 18479099 ~ 18494177 (+)
LOC110531985 LOC106573857 coding downstream 246431 18528546 ~ 18558059 (+)
LOC110499030 LOC106573833 coding downstream 396425 18678540 ~ 18690222 (+)
G17062 NA non-coding upstream 103600 18177378 ~ 18177785 (+)
G17054 NA non-coding upstream 108095 18172979 ~ 18173290 (+)
G17053 NA non-coding upstream 108495 18172607 ~ 18172890 (+)
G17033 NA non-coding upstream 118439 18162745 ~ 18162946 (+)
G17027 NA non-coding upstream 124351 18156632 ~ 18157034 (+)
G17317 LOC100380752 non-coding downstream 291989 18574104 ~ 18577267 (+)
G17340 NA non-coding downstream 408159 18690274 ~ 18691763 (+)
G17453 NA non-coding downstream 479421 18761536 ~ 18800919 (+)
G17546 NA non-coding downstream 667387 18949502 ~ 18950254 (+)
G17555 NA non-coding downstream 701344 18983459 ~ 18983729 (+)
LOC110495874 LOC106573877 other upstream 616377 17654164 ~ 17673094 (+)
LOC110492876 LOC106613263 other upstream 1313595 16962997 ~ 16967790 (+)
LOC110492606 LOC106573909 other upstream 1360976 16916482 ~ 16920945 (+)
LOC118941201 NA other upstream 1700503 16578956 ~ 16592967 (+)
G17420 NA other downstream 600608 18882723 ~ 18956208 (+)
G18481 NA other downstream 1282734 19564849 ~ 19565221 (+)
LOC110502506 LOC106573550 other downstream 1286670 19568684 ~ 19575028 (+)
LOC110503939 LOC106573564 other downstream 1581676 19863734 ~ 19865619 (+)
G19083 NA other downstream 1633471 19915586 ~ 19915832 (+)

Expression


Co-expression Network