Gene
RNA
| Item | Value |
|---|---|
| gene id | G17546 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 18949502 ~ 18950254 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| microtubule-associated protein 6-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU20546 | True | 480 | lncRNA | 0.46 | 2 | 18949502 | 18950254 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499562 | LOC106573826 | coding | upstream | 70585 | 18859952 ~ 18878917 (+) |
| tnfaip8l1 | LOC106573828 | coding | upstream | 96548 | 18841198 ~ 18852954 (+) |
| LOC110499138 | LOC106573831 | coding | upstream | 183545 | 18737655 ~ 18765957 (+) |
| LOC110499030 | LOC106573833 | coding | upstream | 259280 | 18678540 ~ 18690222 (+) |
| LOC110531985 | LOC106573857 | coding | upstream | 391443 | 18528546 ~ 18558059 (+) |
| LOC110500236 | LOC106573821 | coding | downstream | 7673 | 18957927 ~ 18972186 (+) |
| LOC110500307 | LOC106573820 | coding | downstream | 73962 | 19024216 ~ 19041967 (+) |
| LOC110500387 | cherp | coding | downstream | 102321 | 19052575 ~ 19064650 (+) |
| calr3a | crt | coding | downstream | 118738 | 19068992 ~ 19076771 (+) |
| rad23ab | LOC106573817 | coding | downstream | 126570 | 19076824 ~ 19084655 (+) |
| G17453 | NA | non-coding | upstream | 148583 | 18761536 ~ 18800919 (+) |
| G17340 | NA | non-coding | upstream | 257739 | 18690274 ~ 18691763 (+) |
| G17317 | LOC100380752 | non-coding | upstream | 372235 | 18574104 ~ 18577267 (+) |
| G17143 | NA | non-coding | upstream | 667387 | 18281385 ~ 18282115 (+) |
| G17062 | NA | non-coding | upstream | 771717 | 18177378 ~ 18177785 (+) |
| G17555 | NA | non-coding | downstream | 33205 | 18983459 ~ 18983729 (+) |
| G17561 | NA | non-coding | downstream | 40557 | 18990811 ~ 18991072 (+) |
| G17566 | NA | non-coding | downstream | 43963 | 18994217 ~ 18994606 (+) |
| G17567 | NA | non-coding | downstream | 48846 | 18999100 ~ 18999303 (+) |
| G17576 | NA | non-coding | downstream | 58637 | 19008891 ~ 19009130 (+) |
| ccdc124 | cc124 | other | upstream | 958326 | 17975918 ~ 17991176 (+) |
| LOC110495874 | LOC106573877 | other | upstream | 1284494 | 17654164 ~ 17673094 (+) |
| LOC110492876 | LOC106613263 | other | upstream | 1981712 | 16962997 ~ 16967790 (+) |
| LOC110492606 | LOC106573909 | other | upstream | 2029093 | 16916482 ~ 16920945 (+) |
| LOC118941201 | NA | other | upstream | 2368620 | 16578956 ~ 16592967 (+) |
| G18481 | NA | other | downstream | 614595 | 19564849 ~ 19565221 (+) |
| LOC110502506 | LOC106573550 | other | downstream | 618531 | 19568684 ~ 19575028 (+) |
| LOC110503939 | LOC106573564 | other | downstream | 913537 | 19863734 ~ 19865619 (+) |
| G19083 | NA | other | downstream | 965332 | 19915586 ~ 19915832 (+) |
| G19359 | NA | other | downstream | 1292391 | 20242645 ~ 20242875 (+) |
