G22790


Basic Information

Item Value
gene id G22790
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 23199452 ~ 23199686 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU26388
ATATAATGAAGAAATGCACATGCATTTAAATGACCATATTACTGCTCTAGAGTAATCAGAGATAAAGAATAGTTCAGACAAGTGGATACAGACAGATTTTGTAGAATTTGTGCTCTACATGCGTGTTAAATTGAATTGTCATATTTAAACAACATTTGGCACCCCTGGTAAACGATGTTCAGCCACCTACATTTCCGACTGCCTGCTTTCCAAGTCTGTCATTTTGTTAAACCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26388 True 235 lncRNA 0.45 1 23199452 23199686

Neighbor

gene id symbol gene type direction distance location
LOC110510174 LOC106573623 coding upstream 330073 22713674 ~ 22869379 (+)
LOC110513869 LOC106560949 coding upstream 576010 22620666 ~ 22623478 (+)
zgc:110339 LOC106573615 coding upstream 764302 22432310 ~ 22435150 (+)
LOC110532091 LOC106573613 coding upstream 777170 22281089 ~ 22422282 (+)
LOC110508905 twf1 coding upstream 973348 22212332 ~ 22226104 (+)
LOC110511054 NA coding downstream 587807 23787493 ~ 23793379 (+)
LOC110511247 LOC106573632 coding downstream 605328 23805014 ~ 23822354 (+)
LOC110511358 LOC106573633 coding downstream 673228 23872914 ~ 23905175 (+)
LOC110512398 LOC106573641 coding downstream 885983 24085669 ~ 24091336 (+)
LOC110512529 LOC106573640 coding downstream 905660 24105346 ~ 24114557 (+)
G22711 NA non-coding upstream 51921 23143265 ~ 23147531 (+)
G22400 NA non-coding upstream 282447 22916304 ~ 22917005 (+)
G22180 NA non-coding upstream 486712 22712459 ~ 22712740 (+)
G21785 NA non-coding upstream 566106 22633138 ~ 22633346 (+)
G21783 NA non-coding upstream 569049 22630149 ~ 22630403 (+)
G22938 NA non-coding downstream 102467 23302153 ~ 23302443 (+)
G22948 NA non-coding downstream 110283 23309969 ~ 23310287 (+)
G22949 NA non-coding downstream 110671 23310357 ~ 23310895 (+)
G22951 NA non-coding downstream 112742 23312428 ~ 23313961 (+)
G22952 NA non-coding downstream 118244 23317930 ~ 23318455 (+)
G20773 NA other upstream 1631264 21567545 ~ 21568188 (+)
G19400 NA other upstream 2889554 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 2922557 20276590 ~ 20276895 (+)
G19359 NA other upstream 2956577 20242645 ~ 20242875 (+)
G19083 NA other upstream 3283620 19915586 ~ 19915832 (+)
G23109 NA other downstream 338710 23538396 ~ 23538863 (+)
G23135 NA other downstream 374906 23574592 ~ 23574995 (+)
ccl4 ccl4 other downstream 1304969 24504638 ~ 24506125 (+)
G24123 NA other downstream 1350839 24550525 ~ 24552435 (+)

Expression


Co-expression Network