G22948


Basic Information

Item Value
gene id G22948
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 23309969 ~ 23310287 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU26546
aTTTAAAGAagtacatgtctgtcattgaacataCCAATCTCTTTCAAAAAGTATTTAAACAATAAAACCAAATTGACCAACACTTCTGAAAATGGacatacagtggagcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcatcataggcagacaactatgacagacaaaatgagaaaacaaatccagaaaatcacattgtaggatttttaatgactttatttgcaaattatggtggaaaataagtatttggtcaataacaaaagtttatctcaatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU26546 True 319 lncRNA 0.41 1 23309969 23310287

Neighbor

gene id symbol gene type direction distance location
LOC110510174 LOC106573623 coding upstream 440590 22713674 ~ 22869379 (+)
LOC110513869 LOC106560949 coding upstream 686527 22620666 ~ 22623478 (+)
zgc:110339 LOC106573615 coding upstream 874819 22432310 ~ 22435150 (+)
LOC110532091 LOC106573613 coding upstream 887687 22281089 ~ 22422282 (+)
LOC110508905 twf1 coding upstream 1083865 22212332 ~ 22226104 (+)
LOC110511054 NA coding downstream 477206 23787493 ~ 23793379 (+)
LOC110511247 LOC106573632 coding downstream 494727 23805014 ~ 23822354 (+)
LOC110511358 LOC106573633 coding downstream 562627 23872914 ~ 23905175 (+)
LOC110512398 LOC106573641 coding downstream 775382 24085669 ~ 24091336 (+)
LOC110512529 LOC106573640 coding downstream 795059 24105346 ~ 24114557 (+)
G22938 NA non-coding upstream 7526 23302153 ~ 23302443 (+)
G22790 NA non-coding upstream 110283 23199452 ~ 23199686 (+)
G22711 NA non-coding upstream 162438 23143265 ~ 23147531 (+)
G22400 NA non-coding upstream 392964 22916304 ~ 22917005 (+)
G22180 NA non-coding upstream 597229 22712459 ~ 22712740 (+)
G22949 NA non-coding downstream 70 23310357 ~ 23310895 (+)
G22951 NA non-coding downstream 2141 23312428 ~ 23313961 (+)
G22952 NA non-coding downstream 7643 23317930 ~ 23318455 (+)
G22957 NA non-coding downstream 21600 23331887 ~ 23332397 (+)
G22960 LOC106573628 non-coding downstream 25395 23335682 ~ 23336241 (+)
G20773 NA other upstream 1741781 21567545 ~ 21568188 (+)
G19400 NA other upstream 3000071 20309425 ~ 20309898 (+)
G19380 LOC100194703 other upstream 3033074 20276590 ~ 20276895 (+)
G19359 NA other upstream 3067094 20242645 ~ 20242875 (+)
G19083 NA other upstream 3394137 19915586 ~ 19915832 (+)
G23109 NA other downstream 228109 23538396 ~ 23538863 (+)
G23135 NA other downstream 264305 23574592 ~ 23574995 (+)
ccl4 ccl4 other downstream 1194368 24504638 ~ 24506125 (+)
G24123 NA other downstream 1240238 24550525 ~ 24552435 (+)

Expression


Co-expression Network