XLOC_020068 (CU652528.1)



Basic Information


Item Value
gene id XLOC_020068
gene name CU652528.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 3375262 ~ 3376270 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00040020
aatcaaagaattatttgtattggtcatgtaagggtcatataccaactgaacttctactgttgtgtgtgagtgctgtgcgTATGTAACagcatttttgcagaagtagatagatgcgggtccaaaattaaattcagctctgcagaaacttcctgtctgaagagaggtgttaaaactgaacacagaacacagaaagttgtatgctttttttgttgtgcagagaattcgcagaaaaagaggaagtatgtctaaggtgcggccaatggaggactgaacaattaCTGACaaatgacgttacaccaaaactccacctgttaatatcagttgtgtatatatgctggagtccagaaatgtatgttagttgtgaacctcttgaatgtaattcttgtattgcattggggtaacccAGAACTCTGTCAtccaattattcatttgtatctaataaattactaatatttttggcatta

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094571

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00040020 True 464 processed_transcript 0.37 2 3375262 3376270

Neighbor


gene id symbol gene type direction distance location
XLOC_020067 NA coding upstream 39381 3329052 ~ 3335881 (+)
XLOC_020066 gipc3 coding upstream 47021 3303671 ~ 3328241 (+)
XLOC_020065 CU929402.2 coding upstream 103555 3244950 ~ 3271707 (+)
XLOC_020064 si:ch1073-178p5.3 coding upstream 135428 3238474 ~ 3239834 (+)
XLOC_020063 CU929402.1 coding upstream 140768 3232925 ~ 3234494 (+)
XLOC_020069 CU539058.1 coding downstream 8462 3384732 ~ 3388004 (+)
XLOC_020070 CABZ01031768.1 coding downstream 384487 3760757 ~ 3760871 (+)
XLOC_020071 FO904903.1 coding downstream 538048 3914318 ~ 3929075 (+)
XLOC_020072 NA coding downstream 688331 4064601 ~ 4167110 (+)
XLOC_020073 NA coding downstream 707326 4083596 ~ 4085474 (+)
XLOC_020061 NA non-coding upstream 152845 3219003 ~ 3222417 (+)
XLOC_020058 NA non-coding upstream 264749 3110036 ~ 3110513 (+)
XLOC_020054 NA non-coding upstream 447646 2922151 ~ 2927616 (+)
XLOC_020050 NA non-coding upstream 547406 2814463 ~ 2827856 (+)
XLOC_020077 CR751224.2 non-coding downstream 1301597 4677867 ~ 4677981 (+)

Expression



Co-expression Network