XLOC_020135



Basic Information


Item Value
gene id XLOC_020135
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 6870291 ~ 6873611 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042034
TAGTCCAGACTCAGGAAGAAGAAATAACATACGTTGATCCCATAATCCACCACAGAAAACCACGGAAATCGattaaagAGGAAGATCATGTGGAGTATTTACCTCTTGCCTTGAGATGATCATCCAAATCCTGTGAGGAATAGATGCAAAACTCTCAACAAAAGGGGTTTAAAACATTGCTGTGGCCTAATTGGGAATAGATCTGGCATGTACATGCATATGATAGACTTTTCTGCTTGATGTAAGTGTGCGTGAGTGTATTGTGAGGTTTCAGTAGTGTGTTATTAAAGGACATTTCTATTCCTGTCCGTGTAGACTTCGgctttagacaaaaataaaacaaaaagtgggAAGATATTGTATGTTGTACATAATAAACATTGCATTTATTCTTAGAATAACAATGGATTCTCCAGTAATGACAGGCAAAAAGCCAAAATAATAAGTTTTATTGAgtttatttttccctttttttagtGTTGgcataataatgatattattttttatattgtgctttctggacactcaaagggccctatcatacacccggcgcaatgtggcgcaaggcgcgacgcaattgttgtttgctagagcacacttcgttattattgttcatttattcatttgctggaaattagaactgaatttattatttgtgcttaacaaacaaaataatttgaaGGCTAATTGTTGT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042034 True 694 lncRNA 0.35 2 6870291 6873611

Neighbor


gene id symbol gene type direction distance location
XLOC_020134 FO904898.2 coding upstream 10853 6858787 ~ 6859438 (+)
XLOC_020133 FO904898.3 coding upstream 15335 6843363 ~ 6854956 (+)
XLOC_020131 NA coding upstream 57419 6812149 ~ 6812872 (+)
XLOC_020130 CT583625.1 coding upstream 111272 6757741 ~ 6759019 (+)
XLOC_020129 CT583625.2 coding upstream 128869 6740039 ~ 6741422 (+)
XLOC_020136 NA coding downstream 6130 6879741 ~ 6881278 (+)
XLOC_020137 FO904898.5 coding downstream 18685 6892296 ~ 6894028 (+)
XLOC_020138 CABZ01065328.2 coding downstream 31599 6905210 ~ 6914557 (+)
XLOC_020139 CU929149.1 coding downstream 69792 6943403 ~ 6949524 (+)
XLOC_020140 NA coding downstream 151851 7025462 ~ 7027516 (+)
XLOC_020123 NA non-coding upstream 165743 6570980 ~ 6704548 (+)
XLOC_020122 NA non-coding upstream 336277 6533698 ~ 6534014 (+)
XLOC_020120 NA non-coding upstream 370989 6494811 ~ 6499302 (+)
XLOC_020115 AL928685.3 non-coding upstream 579941 6290234 ~ 6290350 (+)
XLOC_020141 NA non-coding downstream 159637 7033248 ~ 7067789 (+)
XLOC_020143 NA non-coding downstream 578562 7452173 ~ 7452420 (+)

Expression



Co-expression Network