XLOC_020122


Basic Information

Item Value
gene id XLOC_020122
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 6533698 ~ 6534014 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041868
atgatatattgtgaagatctagagttttcgcagaggggcgtgtccgtggcgacATGACAAACCTctacgcttcgccatggaacaggaaggctatataactcaaccacacaatgtccgatctgcctgaaacttcacatggttgataaaagtcctctcctgaacacatccacataacaatgttgcagtgggcgtggcaaatagactcgacagcgccacctaccaaaattaatcggacgagcccctgatatacgaatcacgcacatgcacgaaaattggcacacacctcaaacatgccaaaacttagaaaaaagtctctt

Function

GO:

id name namespace
GO:0000902 cell morphogenesis biological_process
GO:0032989 cellular component morphogenesis biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041868 True 317 lncRNA 0.46 1 6533698 6534014

Neighbor

gene id symbol gene type direction distance location
XLOC_020121 CR352226.6 coding upstream 17874 6512469 ~ 6515824 (+)
XLOC_020120 NA coding upstream 34396 6494811 ~ 6499302 (+)
XLOC_020119 si:ch211-105n15.1 coding upstream 58280 6471584 ~ 6475418 (+)
XLOC_020117 si:dkey-19a16.13 coding upstream 112540 6320862 ~ 6421158 (+)
XLOC_020118 AL928685.5 coding upstream 166008 6323600 ~ 6367690 (+)
XLOC_020123 NA coding downstream 36966 6570980 ~ 6704548 (+)
XLOC_020124 CR352226.7 coding downstream 53266 6587280 ~ 6587928 (+)
XLOC_020125 si:ch211-209l18.2 coding downstream 79006 6613020 ~ 6690829 (+)
XLOC_020126 CT583625.3 coding downstream 163913 6697927 ~ 6698575 (+)
XLOC_020127 CT583625.4 coding downstream 177535 6711549 ~ 6712197 (+)
XLOC_020115 AL928685.3 non-coding upstream 243348 6290234 ~ 6290350 (+)
XLOC_020114 NA non-coding upstream 257515 6269446 ~ 6276183 (+)
XLOC_020111 NA non-coding upstream 366946 6165804 ~ 6166752 (+)
XLOC_020105 NA non-coding upstream 594297 5921968 ~ 5939401 (+)
XLOC_020131 NA non-coding downstream 278135 6812149 ~ 6812872 (+)
XLOC_020132 NA non-coding downstream 297759 6831773 ~ 6970044 (+)
XLOC_020135 NA non-coding downstream 336277 6870291 ~ 6873611 (+)
XLOC_020136 NA non-coding downstream 345727 6879741 ~ 6881278 (+)

Expression


Co-expression Network