XLOC_020114


Basic Information

Item Value
gene id XLOC_020114
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 6269446 ~ 6276183 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042030
CTGATTTTGATGAGGAGCTTGTGTGCGGGGGTTGGTGGCCCACAGTAAAGCTTTAGCAAAGGGGCCTCAAACTACCTAAAGGAGCCCCTAAAGGTGACATTTGTCCTATATATGTGACTTAATAGAGGCAAGGGTCTGTCTAAACACCCACACTTTAGCACCTAACATTTCCCATGTTAGTTGGCACGAGCATTGCAAGTGTGTGTGACACGCTTTAAAAGTGTGTCTTACCCCACAACCCAGCAAATACAACTTTGATTGCTGAGTTTTGGGTTTGTAAAATTGATTTATGTTTGTGAAGTTTAGGAATAGAGTGTAAAATAGCAGTATAGTGTGGAATTGAATTTTGAACAAGGAAGattacatgatttatgaataaataaa

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042030 True 384 lncRNA 0.40 2 6269446 6276183

Neighbor

gene id symbol gene type direction distance location
XLOC_020113 rnasel4 coding upstream 10706 6254194 ~ 6258740 (+)
XLOC_020112 si:dkey-19a16.11 coding upstream 69735 6198742 ~ 6199711 (+)
XLOC_020111 NA coding upstream 102694 6165804 ~ 6166752 (+)
XLOC_020110 si:dkey-19a16.5 coding upstream 109366 6149121 ~ 6160080 (+)
XLOC_020109 zgc:171887 coding upstream 170022 6096303 ~ 6099424 (+)
XLOC_020115 AL928685.3 coding downstream 14051 6290234 ~ 6290350 (+)
XLOC_020116 rnasel2 coding downstream 17380 6293563 ~ 6294749 (+)
XLOC_020117 si:dkey-19a16.13 coding downstream 44679 6320862 ~ 6421158 (+)
XLOC_020118 AL928685.5 coding downstream 47417 6323600 ~ 6367690 (+)
XLOC_020119 si:ch211-105n15.1 coding downstream 195401 6471584 ~ 6475418 (+)
XLOC_020105 NA non-coding upstream 330045 5921968 ~ 5939401 (+)
XLOC_020104 NA non-coding upstream 346204 5908694 ~ 5923242 (+)
XLOC_020100 NA non-coding upstream 444237 5806851 ~ 5825209 (+)
XLOC_020120 NA non-coding downstream 218628 6494811 ~ 6499302 (+)
XLOC_020122 NA non-coding downstream 257515 6533698 ~ 6534014 (+)
XLOC_020123 NA non-coding downstream 294797 6570980 ~ 6704548 (+)
XLOC_020131 NA non-coding downstream 535966 6812149 ~ 6812872 (+)
XLOC_020101 BX005329.3 non-coding upstream 456992 5810877 ~ 5812454 (+)

Expression


Co-expression Network