Gene
RNA
| Item | Value |
|---|---|
| gene id | G50230 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 46005299 ~ 46005507 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU56124 | True | 209 | lncRNA | 0.38 | 1 | 46005299 | 46005507 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110523903 | LOC106573225 | coding | downstream | 138201 | 45730235 ~ 45867098 (-) |
| LOC110523892 | LOC106573278 | coding | downstream | 324641 | 45632171 ~ 45680658 (-) |
| LOC110523834 | LOC106573224 | coding | downstream | 418218 | 45476653 ~ 45587081 (-) |
| LOC118964648 | NA | coding | downstream | 527458 | 45476653 ~ 45477841 (-) |
| LOC110523755 | NA | coding | downstream | 590635 | 45325909 ~ 45414664 (-) |
| LOC110523921 | LOC106573228 | coding | upstream | 20271 | 46025778 ~ 46076741 (-) |
| tcp11l1 | tcp11l1 | coding | upstream | 80075 | 46085582 ~ 46097107 (-) |
| LOC110524015 | LOC106573241 | coding | upstream | 731928 | 46737435 ~ 46743033 (-) |
| LOC110524028 | LOC106561496 | coding | upstream | 811549 | 46817056 ~ 46839553 (-) |
| LOC118964698 | NA | coding | upstream | 895814 | 46901321 ~ 46902393 (-) |
| G50001 | LOC106674859 | non-coding | downstream | 24803 | 45979652 ~ 45980496 (-) |
| G49997 | NA | non-coding | downstream | 27925 | 45977125 ~ 45977374 (-) |
| G49978 | NA | non-coding | downstream | 40033 | 45965058 ~ 45965266 (-) |
| G49907 | NA | non-coding | downstream | 65527 | 45881070 ~ 45939772 (-) |
| G49931 | NA | non-coding | downstream | 83854 | 45909035 ~ 45921445 (-) |
| G50233 | NA | non-coding | upstream | 10153 | 46015660 ~ 46015867 (-) |
| G50234 | NA | non-coding | upstream | 10565 | 46016072 ~ 46017322 (-) |
| G50262 | NA | non-coding | upstream | 105147 | 46110654 ~ 46110971 (-) |
| G50282 | wt1 | non-coding | upstream | 151218 | 46156725 ~ 46159520 (-) |
| G50306 | NA | non-coding | upstream | 187987 | 46193494 ~ 46194056 (-) |
| G49962 | NA | other | downstream | 55348 | 45948958 ~ 45949951 (-) |
| G49774 | NA | other | downstream | 284175 | 45720805 ~ 45721124 (-) |
| tspan9a | LOC106573177 | other | downstream | 2876270 | 42852829 ~ 43129052 (-) |
| G41868 | NA | other | downstream | 6983274 | 39021805 ~ 39022025 (-) |
| G40768 | LOC106573348 | other | downstream | 7813563 | 38187488 ~ 38191736 (-) |
| G51214 | NA | other | upstream | 1059267 | 47064774 ~ 47236625 (-) |
| G51285 | LOC106561952 | other | upstream | 1283432 | 47288939 ~ 47289681 (-) |
| G51649 | LOC106573246 | other | upstream | 1372134 | 47377641 ~ 47378543 (-) |
| LOC110524104 | LOC106573248 | other | upstream | 1536869 | 47541224 ~ 47561223 (-) |
| LOC110524264 | LOC106573263 | other | upstream | 2288601 | 48291626 ~ 48304829 (-) |
