G50234


Basic Information

Item Value
gene id G50234
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 46016072 ~ 46017322 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU56128
TAGTTTATTCTGCAGCTGAATCTTTTTTTTCACTGTCACAACATCACTTCATTGGCTTTTTTTTTCAACTTTCGAAAAATGTTTAATACTCTCCTTAATCATAAGCTGTGCAAAACCCAGGCTCTGATTTGACTTTAGTTTGGCATTTCTATGAGTTAGTGTGCTGTAGGGTTTACTGCCATAACTTAATACCTTGCTTCTATCATGAGAATAATTGGTGTGCGTTTTCTTCCCAGTGTGAAATTGAACACAAAAATATCTTTCTTCAGATCGTCATTTATGGTAATGTCTTACCTGGGAGACAGTGGCACTAGCTTacgatttttttgtgtgtgtgcatgcagtagCCTAGGTTGTTTGCTTTGATTCTGCTGATTAGTAATATTGAATGACCACTAGTAACAGTACTATTGAATTACTGTGAATAGAATTCCATTGAATCAGATGGAACAACAGCCTTTTGgtatttttggtattttattaggatccccattagctgttgcaaaagcagcagctactcttcctggggtccacacaaaacatgaaacataatacagaatggcataatacagaacatcaatagacaagaacagctcaaggacagaactacatacatttaaaaaaaggtacacgtagcctacatatcaatgtacacacaaactatctaggtcaaataggggagaggcgttgtgccgcgaggtgttgctatatctgttttttgaaaccaggtttgctgtttatttgagcaatatgagatggaaggaagttccatgcaataagggctctatataatactgtacgctttcttgaatttgttctggatttggggactgtgaaaagacccctggtggcatgtctggtgggataagtgtgtgtgtcagagctgtgtgtaagttgactatgcaaacaatttgggattttcaacacattaaagTTTCTTAATAAaataagaagtgatgcagtcagtctctcctcaactcttagccaagagagactggcatgcatagtatttatatcagccctctgattacaattaagagcaaaacgtgccattcagcttaactaggtctttccttgcagcactggaccacacgactggacaataatcaagattagacaaaactagagcctgcaggacttgctttttgactgtggtgtcaaaaaagcagagcatctctttattgcGGCTAGACCTCTCGAACACCTCCCCATCGTTAAAAGGCAATGTTGTTGCTATGCTGTGACTGAAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU56128 True 1251 lncRNA 0.39 1 46016072 46017322

Neighbor

gene id symbol gene type direction distance location
LOC110523903 LOC106573225 coding downstream 148974 45730235 ~ 45867098 (-)
LOC110523892 LOC106573278 coding downstream 335414 45632171 ~ 45680658 (-)
LOC110523834 LOC106573224 coding downstream 428991 45476653 ~ 45587081 (-)
LOC118964648 NA coding downstream 538231 45476653 ~ 45477841 (-)
LOC110523755 NA coding downstream 601408 45325909 ~ 45414664 (-)
LOC110523921 LOC106573228 coding upstream 8456 46025778 ~ 46076741 (-)
tcp11l1 tcp11l1 coding upstream 68260 46085582 ~ 46097107 (-)
LOC110524015 LOC106573241 coding upstream 720113 46737435 ~ 46743033 (-)
LOC110524028 LOC106561496 coding upstream 799734 46817056 ~ 46839553 (-)
LOC118964698 NA coding upstream 883999 46901321 ~ 46902393 (-)
G50233 NA non-coding downstream 205 46015660 ~ 46015867 (-)
G50230 NA non-coding downstream 10565 46005299 ~ 46005507 (-)
G50001 LOC106674859 non-coding downstream 35576 45979652 ~ 45980496 (-)
G49997 NA non-coding downstream 38698 45977125 ~ 45977374 (-)
G49978 NA non-coding downstream 50806 45965058 ~ 45965266 (-)
G50262 NA non-coding upstream 93332 46110654 ~ 46110971 (-)
G50282 wt1 non-coding upstream 139403 46156725 ~ 46159520 (-)
G50306 NA non-coding upstream 176172 46193494 ~ 46194056 (-)
G50307 NA non-coding upstream 177170 46194492 ~ 46194720 (-)
G50357 NA non-coding upstream 243753 46261075 ~ 46265574 (-)
G49962 NA other downstream 66121 45948958 ~ 45949951 (-)
G49774 NA other downstream 294948 45720805 ~ 45721124 (-)
tspan9a LOC106573177 other downstream 2887043 42852829 ~ 43129052 (-)
G41868 NA other downstream 6994047 39021805 ~ 39022025 (-)
G40768 LOC106573348 other downstream 7824336 38187488 ~ 38191736 (-)
G51214 NA other upstream 1047452 47064774 ~ 47236625 (-)
G51285 LOC106561952 other upstream 1271617 47288939 ~ 47289681 (-)
G51649 LOC106573246 other upstream 1360319 47377641 ~ 47378543 (-)
LOC110524104 LOC106573248 other upstream 1525054 47541224 ~ 47561223 (-)
LOC110524264 LOC106573263 other upstream 2276786 48291626 ~ 48304829 (-)

Expression


Co-expression Network