XLOC_020155



Basic Information


Item Value
gene id XLOC_020155
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 7770917 ~ 7801971 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042047
TGTTTGAATGTAggagaataaaaaaagacaatttgaGAATCTTGATAAACATGGACCCTGGTCACCTCAGTTATTTACAGATGGCTGATAAACTATCAAGACTTTATAACCCTTGAGTTACTCACCAGTAAAATTAACAGCGAATTTCTTGTATGTTGTCTGTTTGTTGCTGCTGATCCTCACTGTATAATATCCAGCATCTGTGTCTTTCATCTTGTCTAAGGTCAGAAATCCAGTCTGGTCATTCAGCTGCAGTCTGCCTTTGTATCTTTCATCAGCATTATAATATGGTGAACTCTTGGTCTCTTTATCTTCTTTAGCCAGGAGTTTTCCTTCATCTCCAAACCTCCACACAATCAGCTCATCTCCGTGAAATTCAGTAACATCAGTCTCTAGAACAAGTGGTTTTCCCTCTGTC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042047 True 418 lncRNA 0.39 2 7770917 7801971

Neighbor


gene id symbol gene type direction distance location
XLOC_020154 cela1.5 coding upstream 16526 7742211 ~ 7754391 (+)
XLOC_020153 si:ch73-44m9.5 coding upstream 31368 7738966 ~ 7739549 (+)
XLOC_020150 AL929276.1 coding upstream 108321 7655271 ~ 7662596 (+)
XLOC_020149 NA coding upstream 214297 7545824 ~ 7556620 (+)
XLOC_020148 cela1.5 coding upstream 262023 7497319 ~ 7508894 (+)
XLOC_020157 NA coding downstream 119565 7921536 ~ 7929272 (+)
XLOC_020158 CABZ01034698.1 coding downstream 210561 8012532 ~ 8018914 (+)
XLOC_020159 CABZ01077220.2 coding downstream 463562 8265533 ~ 8265649 (+)
XLOC_020160 CABZ01077220.1 coding downstream 470422 8272393 ~ 8274379 (+)
XLOC_020161 NA coding downstream 495662 8297633 ~ 8314868 (+)
XLOC_020143 NA non-coding upstream 318497 7452173 ~ 7452420 (+)
XLOC_020141 NA non-coding upstream 703128 7033248 ~ 7067789 (+)
XLOC_020140 NA non-coding upstream 743401 7025462 ~ 7027516 (+)
XLOC_020139 CU929149.1 non-coding upstream 821393 6943403 ~ 6949524 (+)
XLOC_020164 NA non-coding downstream 537234 8339205 ~ 8356509 (+)
XLOC_020166 NA non-coding downstream 573795 8375766 ~ 8495359 (+)

Expression



Co-expression Network