XLOC_020156 (si:ch73-44m9.2)


Basic Information

Item Value
gene id XLOC_020156
gene name si:ch73-44m9.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 7792791 ~ 7795193 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040119
ATTGCTGCTGAATTCAGTTGAATCACTTCTGTCCCACTAATTCAAACATGTCAAAACTGGAGTTACTCCAGCAAGCTGGCCAGCATCTCCCGTAGATAAGAAGGAATTGCAcagagGGCATAATATTTGGAAAGTGATGGCTACCATTGATGAgAATGATGGAGAGCTTGCATTCTCGGAGCATTTTCTGTGTATCTTAATGAAGATTATGAAAACCTCATGAAGGAGTATACTgaCACAGGCTTTGAAaactctgagagagagagagagagagacatggcCAATACTCTCATTTATAATCTACATCATCAGACCTGAAGGTGCAGAAGCCTGTGACCCACCATCAGGTGTTGGACTGATTGTTGAGGGAGTGAAAGTGCTTCAGAACCTTGGCGATGTCACCAAGGCGTGTGCTCTTCTTTTGGGAGTAATATACAGCTTGAGTCTCAGTTATCCTTCAGACCTGAAATACACCTGAGTTTTTCCACAAAGTGTTGCTGGGACTTGAAGAACTCAAGAGCAAACTAGGCTGAATCAGTATATCATTCTGGACAAATGAAAGAAATAGAGGAAGAAGcttttttgtgacatttaaattgttttatggtTTTAAAATTAATGTGATGTTATCTTTGTTGACGGCACCAAAGTTTTAAATGAAGTTCTGCAACTTTAAATGGCTAAATGGTTTGGTTATTTACAAAGATTAGAGGTCAGTTTTAATCTTTTCTTTACTAATGGCTCGAACGATTTCAGATATCCAAAATTGAACCCTGTAGTAGTTTGTGTCATGCTGCCTGCCTTAAactttttgcttttctttttccaagtaaaatgtattatttgcagtTGCATAtagtaaaataacattttggtcaataataaactttttttttttttcgtgtttttATCTGTCTTTTTGAAACTAAATGTTATTTTGGTGGGGGTTGTCATAAAGAGGCCAGTTGTATACTTTAACAGtcgcttaaacattttaaaatatcagcAATGTTGCATTTCATGacagtattgaaataaaatgtccttacacattttcttttgtaaattCTTATTACAATATTTGAAGGAAGTAGCACATTGTAAGAATGTTCACTATTgaccaaagtgttttttttaaaaaaaatcctcttCAAACTGCTATTTCAACTGTTTGTGGATGTTTACAAAAATCGAGGCCAGTTTGAATGTTACTCTAACTATTCTTTGTAAAGATCAGAAATATAGTTTAGCAGTATTTTGACATTCcatgtatttaatttttcaaaTTAAGGTTATTTCAAATTCTTAAAGCCAGTTACACTTTGAAAGACCttgtaaatgtttattgtaaatcctttgtttttgtgtatttgtttcaAAGGACCTGTGAAAttgaaattgttttattaattttaggaGTTGTATGTTGCAAAACCTtgcaaaaaaatacattcattttgtttctaaaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094821

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040119 True 1470 mRNA 0.34 4 7792791 7795193

Neighbor

gene id symbol gene type direction distance location
XLOC_020154 cela1.5 coding upstream 38400 7742211 ~ 7754391 (+)
XLOC_020153 si:ch73-44m9.5 coding upstream 53242 7738966 ~ 7739549 (+)
XLOC_020150 AL929276.1 coding upstream 130195 7655271 ~ 7662596 (+)
XLOC_020149 NA coding upstream 236171 7545824 ~ 7556620 (+)
XLOC_020148 cela1.5 coding upstream 283897 7497319 ~ 7508894 (+)
XLOC_020157 NA coding downstream 126343 7921536 ~ 7929272 (+)
XLOC_020158 CABZ01034698.1 coding downstream 217339 8012532 ~ 8018914 (+)
XLOC_020159 CABZ01077220.2 coding downstream 470340 8265533 ~ 8265649 (+)
XLOC_020160 CABZ01077220.1 coding downstream 477200 8272393 ~ 8274379 (+)
XLOC_020161 NA coding downstream 502440 8297633 ~ 8314868 (+)
XLOC_020143 NA non-coding upstream 340371 7452173 ~ 7452420 (+)
XLOC_020141 NA non-coding upstream 725002 7033248 ~ 7067789 (+)
XLOC_020140 NA non-coding upstream 765275 7025462 ~ 7027516 (+)
XLOC_020139 CU929149.1 non-coding upstream 843267 6943403 ~ 6949524 (+)
XLOC_020164 NA non-coding downstream 544012 8339205 ~ 8356509 (+)
XLOC_020166 NA non-coding downstream 580573 8375766 ~ 8495359 (+)

Expression


Co-expression Network