XLOC_020164


Basic Information

Item Value
gene id XLOC_020164
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 8339205 ~ 8356509 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042050
CTCACTGATTTTACTGACGAGCCAAAACATTAGCCACCACAGGTGAAACTAATATCACTGATCATCTTTTAACAAATCACAAAGTAAGTTCTCAGTAGATCggacagtaaaacaaacaaacaaacaaacaaacaaacgccaTTCAACATGTCGGACGCGGGAATTAGTAAGGAAAACGATCTGAGCAACTTTGAAATGGGGATGATGGGAAGAAGACTGAATGAGAACATCTCTCAAACGGAATTGGCGGCGATGGTAAAACACAAGAGCAGCTGCTCCTGCAAACACTAGCAGAAGAACAACAACAGATATTCCTGCCGCAGCACCTGGAGATAAACCTGAACCTGATCaagaaaaatagaaataaacacCATAAACATTCACTACTGTAGATCTGATAGACTAATGTTTGTTAATGATTCTTGACTAATTacataaaggtaaaaaaaaaaatcatttaagaaAACTATTTGATATTTATGTACTAGGTGTCTGTAATTTACACCAGCTCTAAACACATGGATGTATCTGCCATTTTGGAATGATAAATTTGTCATCAAAATTACAGATATCTTGCATTTTCATGTGATTTAAGATTGCAGTTTGTTTGCAGAGGCTGTagattaaatgtaataatgttcaaTATTGTTCAGTTTCAAAAGTAATATCCTCACCATTGACAGTAACTCTGAATAACCACTCTACAGACGCATCAATCTGGTTGATCTCTACTTTATAAAGTCCAGTGTCTGTGGTTTTGATGTCCATGATGGTCAGATATCCAGTCTGACTGTTCCCATTCAGTCTGTCTTTGAATATCTTAGTGCCATTGGGGGCAATGTTGATCTTGGTTCCATTAAAATCCGCAATGTGTGAAGATTCAAACCTCCACAGTATTCGAGTGATTTTCTTTATATCAGTAATATTAGTGTCAAGAGTCACAGTCCGTCCCTCCAACACTGACACAATCTTTTCAGCACCAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042050 True 983 lncRNA 0.37 2 8339205 8356509

Neighbor

gene id symbol gene type direction distance location
XLOC_020163 CABZ01077217.2 coding upstream 7536 8328377 ~ 8331669 (+)
XLOC_020162 CABZ01077217.1 coding upstream 12233 8313513 ~ 8326972 (+)
XLOC_020161 NA coding upstream 24337 8297633 ~ 8314868 (+)
XLOC_020160 CABZ01077220.1 coding upstream 64826 8272393 ~ 8274379 (+)
XLOC_020159 CABZ01077220.2 coding upstream 73556 8265533 ~ 8265649 (+)
XLOC_020165 si:dkey-19a16.11 coding downstream 9396 8365905 ~ 8369853 (+)
XLOC_020166 NA coding downstream 19257 8375766 ~ 8495359 (+)
XLOC_020167 CABZ01061501.1 coding downstream 51198 8407707 ~ 8440399 (+)
XLOC_020168 CABZ01046407.1 coding downstream 132891 8489400 ~ 8491260 (+)
XLOC_020169 si:ch73-27e22.7 coding downstream 180329 8536838 ~ 8543629 (+)
XLOC_020152 NA non-coding upstream 366336 7677231 ~ 7972869 (+)
XLOC_020171 NA non-coding downstream 213596 8570105 ~ 8574907 (+)
XLOC_020174 NA non-coding downstream 264789 8621298 ~ 8761630 (+)
XLOC_020176 CR450686.2 non-coding downstream 338587 8695096 ~ 8699930 (+)
XLOC_020181 NA non-coding downstream 464988 8821497 ~ 8837723 (+)
XLOC_020151 NA non-coding upstream 366861 7676352 ~ 7972344 (+)

Expression


Co-expression Network