XLOC_020165 (si:dkey-19a16.11)


Basic Information

Item Value
gene id XLOC_020165
gene name si:dkey-19a16.11
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 8365905 ~ 8369853 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040127
GCAGGAAAGCATAGAGACTCTGACAGGAGGTGCTCTTAGAGGTATTTTTTTACACATCACTTTCATATCCGTTTCAGCCGAGACCCATTTCTCTGTTTGCCACAACTGATCTCTCACTTTGTACAGCTGAAATCTTctgcttttttgaaaatgattCTGTTTGTCTTCAATCTGACTCTATTTTATCTATTTGGTGTGTCTGATGCCGTTAGAGTGAAGTCAGTGATGGTTGGAGAATCAGTCACTCTAGAAATACAGAGAAGCGGGGACATCGAGTGGAAGTTTAGATCCCACAACATTCTTATAGCTTACATCAGCAGAGATGAAATCAAATTGCAAGAAAAAGTTCTTGATGGGAGTTTCAGAGGCAGACTGACGCTGGatcagactggatctctgaccatcaacaaCACCAGAACAACAGACTCTGGAGAATATAAAGCAATCATGACCAGCACAGGAATACTACTCCACACATTCAAGCTGACTGTCCATGCTCCTCTTCCGATTCCTGTCATTTCCACCTACTTATCTCCATGCCCAAATACATCATCGGAGTCCAgatgtgtgctgctgtgttcagtggtgaatgtgagGTCTGCGActctctcctggtacaaaggaaacagtgtattgtCCAGCACCAGCGCAtctgatctcagcatcagtctctctctacctctggaggtggaaCTACAGGATAAAAGCACCTACAGCTGTGTGGTCAGCAACCCCATCAGCAACCAGACCACGCATCTGGACATCGACACACTCTGTAACACATGCTCAGGTATGGCAGTTTTGATACTAACACTTATTAGTCAGTTCCACAATAAATAA

Function

symbol description
si:dkey-19a16.11 Predicted to be located in membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116207

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040127 True 840 mRNA 0.44 3 8365905 8369853

Neighbor

gene id symbol gene type direction distance location
XLOC_020164 NA coding upstream 9396 8339205 ~ 8356509 (+)
XLOC_020163 CABZ01077217.2 coding upstream 34236 8328377 ~ 8331669 (+)
XLOC_020162 CABZ01077217.1 coding upstream 38933 8313513 ~ 8326972 (+)
XLOC_020161 NA coding upstream 51037 8297633 ~ 8314868 (+)
XLOC_020160 CABZ01077220.1 coding upstream 91526 8272393 ~ 8274379 (+)
XLOC_020166 NA coding downstream 5913 8375766 ~ 8495359 (+)
XLOC_020167 CABZ01061501.1 coding downstream 37854 8407707 ~ 8440399 (+)
XLOC_020168 CABZ01046407.1 coding downstream 119547 8489400 ~ 8491260 (+)
XLOC_020169 si:ch73-27e22.7 coding downstream 166985 8536838 ~ 8543629 (+)
XLOC_020170 zmp:0000000984 coding downstream 181960 8551813 ~ 8553791 (+)
XLOC_020159 CABZ01077220.2 non-coding upstream 100256 8265533 ~ 8265649 (+)
XLOC_020152 NA non-coding upstream 393036 7677231 ~ 7972869 (+)
XLOC_020171 NA non-coding downstream 200252 8570105 ~ 8574907 (+)
XLOC_020174 NA non-coding downstream 251445 8621298 ~ 8761630 (+)
XLOC_020176 CR450686.2 non-coding downstream 325243 8695096 ~ 8699930 (+)
XLOC_020181 NA non-coding downstream 451644 8821497 ~ 8837723 (+)

Expression


Co-expression Network