G55627


Basic Information

Item Value
gene id G55627
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 50765363 ~ 50767431 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU61943
gggtctgctgtccggacctctggcagtctctatgggggtgccacagggttcaattattggaccgactctcttctctgtatacatcaatgaggtcgctcttgctgctggtgagtctctgatccacctctatgcagacgacaccattctgtatacttctggcccttctttggacactgtgttaacaaccctccaggcaagcttcaatgccatacaactctccttccgtggcctccaattgctcttaaatacaagtaaaactaaatgcatgctcttcaaccgatcgctacctgtacctacccgcctgtccaacattactactctggacggctctgacttagaatacgtggacaactacaaatacttaggtgtctggttagactgtaaactctccttccagacccatatcaaacatctccaatccaaagttaaatctagaattggcttcctattttgcaacaaagcatccttcactcatgctgccaaacatacccttgtaaaactgaccatcctaccaatcctcgactttggcgatgtcatttacaaaatagcctccaataccctactcaacaaattggatgcagtctatcacagtgcaatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61943 True 599 TUCP 0.46 2 50765363 50767431

Neighbor

gene id symbol gene type direction distance location
LOC110524488 LOC106573155 coding downstream 13191 50718636 ~ 50752172 (-)
LOC110524445 LOC106573110 coding downstream 390832 50367566 ~ 50374531 (-)
LOC110524441 LOC106573156 coding downstream 495062 50260404 ~ 50270301 (-)
LOC110524413 LOC106573141 coding downstream 888871 49848378 ~ 49876492 (-)
LOC110532387 tmtc3 coding downstream 942391 49763995 ~ 49822972 (-)
LOC110524514 borcs5 coding upstream 10285 50777716 ~ 50792069 (-)
LOC110532393 ckap5 coding upstream 41282 50808713 ~ 50850668 (-)
mapk8ip1a LOC106573101 coding upstream 104044 50871475 ~ 50888496 (-)
LOC110532401 NA coding upstream 130099 50897530 ~ 50991398 (-)
zgc:101566 LOC106573100 coding upstream 325094 51041431 ~ 51144745 (-)
G55298 NA non-coding downstream 19909 50744255 ~ 50745454 (-)
G55611 NA non-coding downstream 32250 50730182 ~ 50733113 (-)
G55553 NA non-coding downstream 126221 50638913 ~ 50639142 (-)
G55417 LOC100194703 non-coding downstream 340620 50424485 ~ 50424743 (-)
G55416 NA non-coding downstream 341523 50423621 ~ 50423840 (-)
G55665 NA non-coding upstream 84775 50852206 ~ 50852412 (-)
G55753 NA non-coding upstream 122993 50890424 ~ 50891828 (-)
G55755 NA non-coding upstream 125886 50893317 ~ 50896831 (-)
G55840 NA non-coding upstream 226254 50993685 ~ 50993951 (-)
G55408 NA other downstream 353235 50411634 ~ 50412128 (-)
LOC110532382 LOC106573120 other downstream 1779446 48971580 ~ 49044257 (-)
LOC110524264 LOC106573263 other downstream 2461227 48291626 ~ 48304829 (-)
LOC110524104 LOC106573248 other downstream 3204154 47541224 ~ 47561223 (-)
G51649 LOC106573246 other downstream 3386820 47377641 ~ 47378543 (-)
G56372 NA other upstream 633296 51400727 ~ 51412569 (-)
G56764 NA other upstream 979186 51746617 ~ 51747220 (-)
G57742 NA other upstream 1728467 52495898 ~ 52496234 (-)
G58565 LOC106561659 other upstream 2372027 53139458 ~ 53140304 (-)

Expression


Co-expression Network