XLOC_020174



Basic Information


Item Value
gene id XLOC_020174
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 8621298 ~ 8761630 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042053
CATCTGAAATCAACCGCTGCTGGATCCCGGACCATCATGACCTTGTTTTGGTCACAACGTTGGTCCTATATGTTATGTATTATCCACCGCTTCGCTTCTCAATGGTTTCTAAACGCGTAACATATCTCTAtcaacattatatttaaaaatatacaccATTATAGCTGTTTTAGCCTGCCAAACTGCCTTACACAACCAATGAATAACGTAAATCCTTTATCATTTGATTTAACCGAAGGTAAACATCCTCGTCTTGTCATGTTATAAAGCTCTACTGTATGATCCAGTTTCAATTTTAATATCGCAGCTACACAATCGGACACCAGTTTCCGCATTCTGCTCGTCCTCTTTCTCGCGAGATCTCGTTTAAAATACTTGCTCATGTCTATTAAGACAGGTTATTTACGTCCAGTCC

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042053 True 415 lncRNA 0.39 2 8621298 8761630

Neighbor


gene id symbol gene type direction distance location
XLOC_020172 si:ch73-27e22.6 coding upstream 19523 8596974 ~ 8601775 (+)
XLOC_020171 NA coding upstream 46391 8570105 ~ 8574907 (+)
XLOC_020170 zmp:0000000984 coding upstream 67507 8551813 ~ 8553791 (+)
XLOC_020169 si:ch73-27e22.7 coding upstream 77669 8536838 ~ 8543629 (+)
XLOC_020168 CABZ01046407.1 coding upstream 130038 8489400 ~ 8491260 (+)
XLOC_020180 si:dkey-182g1.10 coding downstream 10733 8772363 ~ 8809496 (+)
XLOC_020181 NA coding downstream 59867 8821497 ~ 8837723 (+)
XLOC_020182 NA coding downstream 76795 8838425 ~ 8854534 (+)
XLOC_020183 NA coding downstream 124418 8886048 ~ 8894141 (+)
XLOC_020184 NA coding downstream 165735 8927365 ~ 8953552 (+)
XLOC_020166 NA non-coding upstream 125939 8375766 ~ 8495359 (+)
XLOC_020164 NA non-coding upstream 264789 8339205 ~ 8356509 (+)
XLOC_020161 NA non-coding upstream 306430 8297633 ~ 8314868 (+)
XLOC_020159 CABZ01077220.2 non-coding upstream 355649 8265533 ~ 8265649 (+)
XLOC_020189 NA non-coding downstream 304456 9066086 ~ 9066418 (+)

Expression



Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location