XLOC_020172 (si:ch73-27e22.6)


Basic Information

Item Value
gene id XLOC_020172
gene name si:ch73-27e22.6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 8596974 ~ 8601775 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040132
CGCTTCTGAGACATTTTCTCACAGTGTTGATGAGGAAACTGATAGTAAATATGATTTATGCTCTTGTTTTGACCTCAATGTGCTTGTGGCATTCGGTTGATATGACGGAGGAAGTGAAGATCATATCAGTGAAGGAGGGAGATCCTCTCACCCTACACACTGATATTGatgaggtatcaagatatttgcTGATACAATGGATGTTTGAAAATACTCGAATAGCTGAAGTCAACAGACTCGCAAAGATCAACTCCACATATGATGGTCCAGAAGAGACTTTCAGGGGTAGACTAAAGTTAGATCAGACTGGATCTTTGACCATAACAAACACCAGATCTACTGATTCGGGACGTTATAACCTAATGATTCTGAGAGGACAGAGCAGCTACTTCCAAGTCACAATCTATGGAAGATCATCAGGCTCAGACTGTGTGTCGTCCAAATGCACAAAGAGCAATTCAGTCACCAACCAGCCTGATGAAACCGACATTACTGAACTCCCTCAGTCAACTTCAGAGGAAGTGAAGACCATATCAGTGATGGAGGGAGATTCTGTCACTCTACACACCGGTGTTACAGATGTACAGAAATATTTGTTGATGCAGTGGATGTTCAAAAACACTCGAATAGCTGAAGTCAACAGACTCGCTCAAAACCGTGTCACTTATGATGGCCCAGATGGAAGATTCAGAGATAGACTGAAGTTAGATGAGACTGGATCTCTGATAATCATAAACACCACAACCACAGACTCTGGTCTTTATAAACTAACACTTGTCATCCAAGAAAGCATCTACGTAAATTTCAAACTTACA

Function

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-070705-234 No description available

Ensembl:

ensembl_id ENSDARG00000031731

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040132 True 815 mRNA 0.41 4 8596974 8601775

Neighbor

gene id symbol gene type direction distance location
XLOC_020171 NA coding upstream 22067 8570105 ~ 8574907 (+)
XLOC_020170 zmp:0000000984 coding upstream 43183 8551813 ~ 8553791 (+)
XLOC_020169 si:ch73-27e22.7 coding upstream 53345 8536838 ~ 8543629 (+)
XLOC_020166 NA coding upstream 101615 8375766 ~ 8495359 (+)
XLOC_020173 CR450686.1 coding downstream 10687 8612462 ~ 8748801 (+)
XLOC_020174 NA coding downstream 19523 8621298 ~ 8761630 (+)
XLOC_020175 si:dkey-182g1.2 coding downstream 26289 8628064 ~ 8634560 (+)
XLOC_020176 CR450686.2 coding downstream 93321 8695096 ~ 8699930 (+)
XLOC_020177 zmp:0000000652 coding downstream 99463 8701238 ~ 8702901 (+)
XLOC_020164 NA non-coding upstream 240465 8339205 ~ 8356509 (+)
XLOC_020161 NA non-coding upstream 282106 8297633 ~ 8314868 (+)
XLOC_020159 CABZ01077220.2 non-coding upstream 331325 8265533 ~ 8265649 (+)
XLOC_020181 NA non-coding downstream 219722 8821497 ~ 8837723 (+)
XLOC_020182 NA non-coding downstream 236650 8838425 ~ 8854534 (+)
XLOC_020183 NA non-coding downstream 284273 8886048 ~ 8894141 (+)

Expression


Co-expression Network