G58134


Basic Information

Item Value
gene id G58134
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 52862572 ~ 52862774 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU64625
tacatgctaacatctctgttgacgagtctacgatacgtaaaacactaaacaagaatggtgttcatgggaggacaccatggaagaagccactgctgtccaaaaaaaacattgctgcatgtctgaagttggggcactctgttcacaatgtttacATCAGCAtaccgcttgcccacacaacgccattcatgtggtctgcggttgtg

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU64625 True 203 lncRNA 0.46 1 52862572 52862774

Neighbor

gene id symbol gene type direction distance location
LOC110524813 LOC106573076 coding upstream 139734 52707550 ~ 52722838 (+)
LOC110524804 NA coding upstream 159925 52698680 ~ 52702647 (+)
LOC110524698 LOC106573080 coding upstream 311363 52528778 ~ 52551209 (+)
LOC110524688 LOC106573082 coding upstream 337854 52520506 ~ 52524718 (+)
LOC110524629 LOC106573088 coding upstream 944588 51900323 ~ 51917984 (+)
LOC110524844 LOC106573071 coding downstream 20096 52882870 ~ 52889860 (+)
LOC110524847 LOC106561671 coding downstream 41870 52904644 ~ 52925473 (+)
LOC110524881 LOC106573069 coding downstream 62861 52925635 ~ 52936875 (+)
LOC110524905 s35b4 coding downstream 93029 52955803 ~ 52962832 (+)
LOC118964862 NA coding downstream 116881 52965815 ~ 52988549 (+)
G57811 NA non-coding upstream 113944 52744356 ~ 52748628 (+)
G57802 NA non-coding upstream 231249 52624389 ~ 52631323 (+)
G57758 NA non-coding upstream 270207 52565022 ~ 52592365 (+)
G57769 NA non-coding upstream 307195 52553300 ~ 52555377 (+)
G58205 NA non-coding downstream 80111 52942885 ~ 52943257 (+)
G58229 NA non-coding downstream 133852 52996626 ~ 52996842 (+)
G58230 NA non-coding downstream 134450 52997224 ~ 52997430 (+)
G58192 NA non-coding downstream 168349 53031123 ~ 53031953 (+)
LOC110524575 fgf3 other upstream 1411637 51449353 ~ 51451460 (+)
LOC118964841 NA other upstream 2778576 50037523 ~ 50184257 (+)
G53181 NA other upstream 3968660 48893497 ~ 48893912 (+)
G52324 NA other upstream 4479315 48380542 ~ 48383257 (+)
G52080 NA other upstream 4837614 48006674 ~ 48024958 (+)
LOC118936380 LOC106581842 other downstream 803441 53632830 ~ 53705421 (+)
G59031 NA other downstream 1125366 53988140 ~ 53988597 (+)
LOC110525327 LOC106573036 other downstream 1182075 54044813 ~ 54089850 (+)
G59963 NA other downstream 1858414 54721188 ~ 54721463 (+)
G61202 LOC106573044 other downstream 3042734 55905508 ~ 55923376 (+)

Expression


Co-expression Network