G58659


Basic Information

Item Value
gene id G58659
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 53295248 ~ 53296349 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU65219
ATCATAAAAGGTAACAGGTAACACTGTTAAGTAGACCGTACGCAAACTCAGTACTGTATTCACTAGGAAaactgggcctgtattcataaagcgtctctgagtaggaaGGCTTCATTAATATGGGCCGTGGACGAGTACTAAGAGCACCCTGAATATAATTGGAAGGTTCCATCCGAAATAGCACCCTATACTCTACTACCTTTGACTAGAAGCACATAGGCTccggtcaaaagaagtgcactatataaggagtaGGATGCTATTTCGGAAGCATCCGAGAAGTTCAGTGACTGTATGTGTGCTTCTTTTCCCATACAGAGCATGCGTGCAACACAATTATGATGAATGCAATTCAAAATAAGGAACCATTTTACAGATGGTTGAAGGAGGGTTCgggaatgaatggatggatggatggatgacagtGGCTGGACAGTGCAGTGGGATTTCAGCTCCGCTCACACACCCTTCATGACAGACACAGGAAGTTTGGTGCAGTAAGAGAGAAGAGTTGTCATCATGCGTTCCAGATCGCCCACGGTACACTGTAGTCACGTTGTGCAGGGTATTAGATTGTCAGGTCATATTGATATATTATCTGAAATTTAAataatacagtacagtggaaGCTCCAGTTCTAACAACTATGTGAACCTGTTTTCACCAAAGCCAATCACTGTTCCCATATCTTCTATCAAAATGGAGGTACAGTATCTCAGGTTGACAGCAGGTGGATATGGTCAGGGCTGAACTGGCCTCAACAGTATCTTGTGAAATGAAAGGTCCAGAAATATGGATGACGTTTGAATACATCCCCGTTGCACGTCAACAGGTGAGAGAAAATCCAAAACGTCAGACTGCAACAGCGAAGATGTCGGTCGGGTCAGGGTCCGTCGgggtccgtctgtctgtcttacactcacacacacacagaggagtttTGAGGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU65219 True 948 lncRNA 0.45 2 53295248 53296349

Neighbor

gene id symbol gene type direction distance location
ucmab LOC106573148 coding downstream 44345 53238335 ~ 53250903 (-)
LOC110524998 NA coding downstream 210525 53077658 ~ 53084723 (-)
LOC110524937 LOC106573065 coding downstream 235302 53047740 ~ 53059946 (-)
LOC118964864 NA coding downstream 275129 53007483 ~ 53020119 (-)
LOC110524896 LOC106573068 coding downstream 339532 52943860 ~ 52955716 (-)
LOC110525034 elk3 coding upstream 2014 53298363 ~ 53310125 (-)
LOC110525078 LOC105021811 coding upstream 40681 53334724 ~ 53338484 (-)
LOC110525089 LOC106573055 coding upstream 77352 53373701 ~ 53384476 (-)
LOC110525255 LOC106573039 coding upstream 417364 53713713 ~ 53758738 (-)
LOC110525178 LOC106581842 coding upstream 465263 53761612 ~ 53774544 (-)
G58596 NA non-coding downstream 89933 53204782 ~ 53205315 (-)
G58523 NA non-coding downstream 247577 53047592 ~ 53047671 (-)
G58519 NA non-coding downstream 263227 53030578 ~ 53032021 (-)
G58518 NA non-coding downstream 266534 53028355 ~ 53028714 (-)
G58672 NA non-coding upstream 49384 53345733 ~ 53347979 (-)
G58613 NA non-coding upstream 88268 53384617 ~ 53386535 (-)
G58694 NA non-coding upstream 97599 53393948 ~ 53400122 (-)
G58717 NA non-coding upstream 127249 53423598 ~ 53423861 (-)
G58719 NA non-coding upstream 130275 53426624 ~ 53426857 (-)
G58565 LOC106561659 other downstream 154944 53139458 ~ 53140304 (-)
G57742 NA other downstream 799014 52495898 ~ 52496234 (-)
G56764 NA other downstream 1548028 51746617 ~ 51747220 (-)
G56372 NA other downstream 1890905 51400727 ~ 51412569 (-)
LOC110524514 borcs5 other downstream 2503179 50777716 ~ 50792069 (-)
G58718 LOC100194703 other upstream 129615 53425964 ~ 53426316 (-)
G58842 NA other upstream 292073 53588422 ~ 53588770 (-)
G58958 LOC106581842 other upstream 495481 53791830 ~ 53797014 (-)

Expression


Co-expression Network