G64718


Basic Information

Item Value
gene id G64718
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 59275245 ~ 59280313 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU71690
ctttcaactccctccaaagattttctatggggttgagatctggagatgtcatgtattgtcatgttgtgtcttgtttctgtcctttcccttcaccctgtctccctctgctggtcgtactaggttaccgtttctgtccctctttcccccagctgttccttgtcttctctgactacctcattcaccccttttcccacctgttccctttttccctctgattaggtccctatatctctctctgtttctgctcctgtctttgtcggattcttgtttgtgtgtctcatgcctgaaccagactatcatcgtgtttgctgcaaccttgtcctgtcctgtcggaatctacctgtccatctgagcccacgtgtgttcatcattaaagaaactctgtttgttaattcgcttttgggtcctcattcacgcacctgacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71690 True 426 lncRNA 0.49 2 59275245 59280313

Neighbor

gene id symbol gene type direction distance location
LOC110525756 NA coding upstream 63070 59210006 ~ 59212175 (+)
trnaa-ugc NA coding upstream 213365 59061807 ~ 59061880 (+)
fam160b1 fam160b1 coding upstream 437046 58808370 ~ 58838199 (+)
LOC110525578 NA coding upstream 1311422 57961716 ~ 57963823 (+)
wdr11 wdr11 coding upstream 1337257 57806134 ~ 57940604 (+)
erlin1 LOC106576878 coding downstream 4011 59284324 ~ 59299682 (+)
si:ch211-217g15.3 LOC106576876 coding downstream 60226 59340539 ~ 59342276 (+)
cxcf1a cxcf1a coding downstream 203168 59483481 ~ 59485882 (+)
cxcl12a cxcl12a coding downstream 309351 59589595 ~ 59631391 (+)
LOC110525860 NA coding downstream 319592 59599905 ~ 59608419 (+)
G64716 NA non-coding upstream 2754 59272211 ~ 59272491 (+)
G64645 LOC100196663 non-coding upstream 40680 59212441 ~ 59234565 (+)
G64577 NA non-coding upstream 226986 59047544 ~ 59048259 (+)
G64440 NA non-coding upstream 413239 58858828 ~ 58862006 (+)
G64397 NA non-coding upstream 432196 58841159 ~ 58843049 (+)
G65432 NA non-coding downstream 24453 59304766 ~ 59304983 (+)
G65441 NA non-coding downstream 40491 59320804 ~ 59321015 (+)
G65446 NA non-coding downstream 47343 59327656 ~ 59327869 (+)
G65448 NA non-coding downstream 50788 59331101 ~ 59331325 (+)
G65456 NA non-coding downstream 68042 59348355 ~ 59348657 (+)
G64338 NA other upstream 574866 58699296 ~ 58700379 (+)
G64315 NA other upstream 609339 58665334 ~ 58665906 (+)
G64292 NA other upstream 687660 58586858 ~ 58587585 (+)
G63959 fgfr2 other upstream 1052115 58221522 ~ 58223130 (+)
G63958 NA other upstream 1107067 58166565 ~ 58168178 (+)
G65442 NA other downstream 44323 59324636 ~ 59325129 (+)
G66188 NA other downstream 661173 59941486 ~ 59942064 (+)
G67806 LOC106581772 other downstream 2034561 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 2449452 61729765 ~ 61733388 (+)
G70011 NA other downstream 3994650 63274963 ~ 63275296 (+)

Expression


Co-expression Network