G65441


Basic Information

Item Value
gene id G65441
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 59320804 ~ 59321015 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU72487
ccatgtttgacagttgtgatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgtcttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttct

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU72487 True 212 lncRNA 0.35 1 59320804 59321015

Neighbor

gene id symbol gene type direction distance location
erlin1 LOC106576878 coding upstream 21122 59284324 ~ 59299682 (+)
LOC110525756 NA coding upstream 108629 59210006 ~ 59212175 (+)
trnaa-ugc NA coding upstream 258924 59061807 ~ 59061880 (+)
fam160b1 fam160b1 coding upstream 482605 58808370 ~ 58838199 (+)
LOC110525578 NA coding upstream 1356981 57961716 ~ 57963823 (+)
si:ch211-217g15.3 LOC106576876 coding downstream 19524 59340539 ~ 59342276 (+)
cxcf1a cxcf1a coding downstream 162466 59483481 ~ 59485882 (+)
cxcl12a cxcl12a coding downstream 268649 59589595 ~ 59631391 (+)
LOC110525860 NA coding downstream 278890 59599905 ~ 59608419 (+)
ercc6 ercc6 coding downstream 404603 59725618 ~ 59778737 (+)
G65432 NA non-coding upstream 15821 59304766 ~ 59304983 (+)
G64718 NA non-coding upstream 40491 59275245 ~ 59280313 (+)
G64716 NA non-coding upstream 48313 59272211 ~ 59272491 (+)
G64645 LOC100196663 non-coding upstream 86239 59212441 ~ 59234565 (+)
G64577 NA non-coding upstream 272545 59047544 ~ 59048259 (+)
G65446 NA non-coding downstream 6641 59327656 ~ 59327869 (+)
G65448 NA non-coding downstream 10086 59331101 ~ 59331325 (+)
G65456 NA non-coding downstream 27340 59348355 ~ 59348657 (+)
G65458 echs1 non-coding downstream 34105 59355120 ~ 59368018 (+)
G65488 NA non-coding downstream 70137 59391152 ~ 59392490 (+)
G64338 NA other upstream 620425 58699296 ~ 58700379 (+)
G64315 NA other upstream 654898 58665334 ~ 58665906 (+)
G64292 NA other upstream 733219 58586858 ~ 58587585 (+)
G63959 fgfr2 other upstream 1097674 58221522 ~ 58223130 (+)
G63958 NA other upstream 1152626 58166565 ~ 58168178 (+)
G65442 NA other downstream 3621 59324636 ~ 59325129 (+)
G66188 NA other downstream 620471 59941486 ~ 59942064 (+)
G67806 LOC106581772 other downstream 1993859 61314874 ~ 61315252 (+)
G67930 mcmbp other downstream 2408750 61729765 ~ 61733388 (+)
G70011 NA other downstream 3953948 63274963 ~ 63275296 (+)

Expression


Co-expression Network