Gene
RNA
| Item | Value |
|---|---|
| gene id | G65488 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 59391152 ~ 59392490 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| mitochondrial ribosome-associated GTPase 1 isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU72534 | True | 245 | lncRNA | 0.49 | 2 | 59391152 | 59392490 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-217g15.3 | LOC106576876 | coding | upstream | 48876 | 59340539 ~ 59342276 (+) |
| erlin1 | LOC106576878 | coding | upstream | 91470 | 59284324 ~ 59299682 (+) |
| LOC110525756 | NA | coding | upstream | 178977 | 59210006 ~ 59212175 (+) |
| trnaa-ugc | NA | coding | upstream | 329272 | 59061807 ~ 59061880 (+) |
| fam160b1 | fam160b1 | coding | upstream | 552953 | 58808370 ~ 58838199 (+) |
| cxcf1a | cxcf1a | coding | downstream | 90991 | 59483481 ~ 59485882 (+) |
| cxcl12a | cxcl12a | coding | downstream | 197174 | 59589595 ~ 59631391 (+) |
| LOC110525860 | NA | coding | downstream | 207415 | 59599905 ~ 59608419 (+) |
| ercc6 | ercc6 | coding | downstream | 333128 | 59725618 ~ 59778737 (+) |
| drgx | LOC106576867 | coding | downstream | 393639 | 59786129 ~ 59793763 (+) |
| G65458 | echs1 | non-coding | upstream | 23134 | 59355120 ~ 59368018 (+) |
| G65456 | NA | non-coding | upstream | 42495 | 59348355 ~ 59348657 (+) |
| G65448 | NA | non-coding | upstream | 59827 | 59331101 ~ 59331325 (+) |
| G65446 | NA | non-coding | upstream | 63283 | 59327656 ~ 59327869 (+) |
| G65441 | NA | non-coding | upstream | 70137 | 59320804 ~ 59321015 (+) |
| G65519 | rassf4 | non-coding | downstream | 46746 | 59439236 ~ 59447808 (+) |
| G65572 | NA | non-coding | downstream | 142913 | 59535403 ~ 59535961 (+) |
| G65724 | NA | non-coding | downstream | 411764 | 59804254 ~ 59826592 (+) |
| G66057 | NA | non-coding | downstream | 445401 | 59837891 ~ 59838094 (+) |
| G65442 | NA | other | upstream | 66023 | 59324636 ~ 59325129 (+) |
| G64338 | NA | other | upstream | 690773 | 58699296 ~ 58700379 (+) |
| G64315 | NA | other | upstream | 725246 | 58665334 ~ 58665906 (+) |
| G64292 | NA | other | upstream | 803567 | 58586858 ~ 58587585 (+) |
| G63959 | fgfr2 | other | upstream | 1168022 | 58221522 ~ 58223130 (+) |
| G66188 | NA | other | downstream | 548996 | 59941486 ~ 59942064 (+) |
| G67806 | LOC106581772 | other | downstream | 1922384 | 61314874 ~ 61315252 (+) |
| G67930 | mcmbp | other | downstream | 2337275 | 61729765 ~ 61733388 (+) |
| G70011 | NA | other | downstream | 3882473 | 63274963 ~ 63275296 (+) |
| LOC110526969 | stk32c | other | downstream | 5417099 | 64809255 ~ 64946164 (+) |
